Draft genome sequence of Cellulomonas carbonis T26(T) and comparative analysis of six Cellulomonas genomes

Most Cellulomonas strains are cellulolytic and this feature may be applied in straw degradation and bioremediation. In this study, Cellulomonas carbonis T26(T), Cellulomonas bogoriensis DSM 16987(T) and Cellulomonas cellasea 20108(T) were sequenced. Here we described the draft genomic information of...

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Autores principales: Zhuang, Weiping, Zhang, Shengzhe, Xia, Xian, Wang, Gejiao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2015
Materias:
Short Genome Report
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4652355/
https://www.ncbi.nlm.nih.gov/pubmed/26587181
http://dx.doi.org/10.1186/s40793-015-0096-8
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author Zhuang, Weiping
Zhang, Shengzhe
Xia, Xian
Wang, Gejiao
author_facet Zhuang, Weiping
Zhang, Shengzhe
Xia, Xian
Wang, Gejiao
author_sort Zhuang, Weiping
collection PubMed
description Most Cellulomonas strains are cellulolytic and this feature may be applied in straw degradation and bioremediation. In this study, Cellulomonas carbonis T26(T), Cellulomonas bogoriensis DSM 16987(T) and Cellulomonas cellasea 20108(T) were sequenced. Here we described the draft genomic information of C. carbonis T26(T) and compared it to the related Cellulomonas genomes. Strain T26(T) has a 3,990,666 bp genome size with a G + C content of 73.4 %, containing 3418 protein-coding genes and 59 RNA genes. The results showed good correlation between the genotypes and the physiological phenotypes. The information are useful for the better application of the Cellulomonas strains. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s40793-015-0096-8) contains supplementary material, which is available to authorized users.
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spelling pubmed-46523552015-11-20 Draft genome sequence of Cellulomonas carbonis T26(T) and comparative analysis of six Cellulomonas genomes Zhuang, Weiping Zhang, Shengzhe Xia, Xian Wang, Gejiao Stand Genomic Sci Short Genome Report Most Cellulomonas strains are cellulolytic and this feature may be applied in straw degradation and bioremediation. In this study, Cellulomonas carbonis T26(T), Cellulomonas bogoriensis DSM 16987(T) and Cellulomonas cellasea 20108(T) were sequenced. Here we described the draft genomic information of C. carbonis T26(T) and compared it to the related Cellulomonas genomes. Strain T26(T) has a 3,990,666 bp genome size with a G + C content of 73.4 %, containing 3418 protein-coding genes and 59 RNA genes. The results showed good correlation between the genotypes and the physiological phenotypes. The information are useful for the better application of the Cellulomonas strains. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s40793-015-0096-8) contains supplementary material, which is available to authorized users. BioMed Central 2015-11-18 /pmc/articles/PMC4652355/ /pubmed/26587181 http://dx.doi.org/10.1186/s40793-015-0096-8 Text en © Zhuang et al. 2015 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Short Genome Report
Zhuang, Weiping
Zhang, Shengzhe
Xia, Xian
Wang, Gejiao
Draft genome sequence of Cellulomonas carbonis T26(T) and comparative analysis of six Cellulomonas genomes
title Draft genome sequence of Cellulomonas carbonis T26(T) and comparative analysis of six Cellulomonas genomes
title_full Draft genome sequence of Cellulomonas carbonis T26(T) and comparative analysis of six Cellulomonas genomes
title_fullStr Draft genome sequence of Cellulomonas carbonis T26(T) and comparative analysis of six Cellulomonas genomes
title_full_unstemmed Draft genome sequence of Cellulomonas carbonis T26(T) and comparative analysis of six Cellulomonas genomes
title_short Draft genome sequence of Cellulomonas carbonis T26(T) and comparative analysis of six Cellulomonas genomes
title_sort draft genome sequence of cellulomonas carbonis t26(t) and comparative analysis of six cellulomonas genomes
topic Short Genome Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4652355/
https://www.ncbi.nlm.nih.gov/pubmed/26587181
http://dx.doi.org/10.1186/s40793-015-0096-8
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