Complete genome sequence of Thioalkalivibrio paradoxus type strain ARh 1(T), an obligately chemolithoautotrophic haloalkaliphilic sulfur-oxidizing bacterium isolated from a Kenyan soda lake

Thioalkalivibrio paradoxus strain ARh 1(T) is a chemolithoautotrophic, non-motile, Gram-negative bacterium belonging to the Gammaproteobacteria that was isolated from samples of haloalkaline soda lakes. It derives energy from the oxidation of reduced sulfur compounds and is notable for its ability t...

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Autores principales: Berben, Tom, Sorokin, Dimitry Y., Ivanova, Natalia, Pati, Amrita, Kyrpides, Nikos, Goodwin, Lynne A., Woyke, Tanja, Muyzer, Gerard
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2015
Materias:
Short Genome Report
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4653848/
https://www.ncbi.nlm.nih.gov/pubmed/26594306
http://dx.doi.org/10.1186/s40793-015-0097-7
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author Berben, Tom
Sorokin, Dimitry Y.
Ivanova, Natalia
Pati, Amrita
Kyrpides, Nikos
Goodwin, Lynne A.
Woyke, Tanja
Muyzer, Gerard
author_facet Berben, Tom
Sorokin, Dimitry Y.
Ivanova, Natalia
Pati, Amrita
Kyrpides, Nikos
Goodwin, Lynne A.
Woyke, Tanja
Muyzer, Gerard
author_sort Berben, Tom
collection PubMed
description Thioalkalivibrio paradoxus strain ARh 1(T) is a chemolithoautotrophic, non-motile, Gram-negative bacterium belonging to the Gammaproteobacteria that was isolated from samples of haloalkaline soda lakes. It derives energy from the oxidation of reduced sulfur compounds and is notable for its ability to grow on thiocyanate as its sole source of electrons, sulfur and nitrogen. The full genome consists of 3,756,729 bp and comprises 3,500 protein-coding and 57 RNA-coding genes. This organism was sequenced as part of the community science program at the DOE Joint Genome Institute.
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spelling pubmed-46538482015-11-21 Complete genome sequence of Thioalkalivibrio paradoxus type strain ARh 1(T), an obligately chemolithoautotrophic haloalkaliphilic sulfur-oxidizing bacterium isolated from a Kenyan soda lake Berben, Tom Sorokin, Dimitry Y. Ivanova, Natalia Pati, Amrita Kyrpides, Nikos Goodwin, Lynne A. Woyke, Tanja Muyzer, Gerard Stand Genomic Sci Short Genome Report Thioalkalivibrio paradoxus strain ARh 1(T) is a chemolithoautotrophic, non-motile, Gram-negative bacterium belonging to the Gammaproteobacteria that was isolated from samples of haloalkaline soda lakes. It derives energy from the oxidation of reduced sulfur compounds and is notable for its ability to grow on thiocyanate as its sole source of electrons, sulfur and nitrogen. The full genome consists of 3,756,729 bp and comprises 3,500 protein-coding and 57 RNA-coding genes. This organism was sequenced as part of the community science program at the DOE Joint Genome Institute. BioMed Central 2015-11-19 /pmc/articles/PMC4653848/ /pubmed/26594306 http://dx.doi.org/10.1186/s40793-015-0097-7 Text en © Berben et al. 2015 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Short Genome Report
Berben, Tom
Sorokin, Dimitry Y.
Ivanova, Natalia
Pati, Amrita
Kyrpides, Nikos
Goodwin, Lynne A.
Woyke, Tanja
Muyzer, Gerard
Complete genome sequence of Thioalkalivibrio paradoxus type strain ARh 1(T), an obligately chemolithoautotrophic haloalkaliphilic sulfur-oxidizing bacterium isolated from a Kenyan soda lake
title Complete genome sequence of Thioalkalivibrio paradoxus type strain ARh 1(T), an obligately chemolithoautotrophic haloalkaliphilic sulfur-oxidizing bacterium isolated from a Kenyan soda lake
title_full Complete genome sequence of Thioalkalivibrio paradoxus type strain ARh 1(T), an obligately chemolithoautotrophic haloalkaliphilic sulfur-oxidizing bacterium isolated from a Kenyan soda lake
title_fullStr Complete genome sequence of Thioalkalivibrio paradoxus type strain ARh 1(T), an obligately chemolithoautotrophic haloalkaliphilic sulfur-oxidizing bacterium isolated from a Kenyan soda lake
title_full_unstemmed Complete genome sequence of Thioalkalivibrio paradoxus type strain ARh 1(T), an obligately chemolithoautotrophic haloalkaliphilic sulfur-oxidizing bacterium isolated from a Kenyan soda lake
title_short Complete genome sequence of Thioalkalivibrio paradoxus type strain ARh 1(T), an obligately chemolithoautotrophic haloalkaliphilic sulfur-oxidizing bacterium isolated from a Kenyan soda lake
title_sort complete genome sequence of thioalkalivibrio paradoxus type strain arh 1(t), an obligately chemolithoautotrophic haloalkaliphilic sulfur-oxidizing bacterium isolated from a kenyan soda lake
topic Short Genome Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4653848/
https://www.ncbi.nlm.nih.gov/pubmed/26594306
http://dx.doi.org/10.1186/s40793-015-0097-7
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