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Sulphur Atoms from Methionines Interacting with Aromatic Residues Are Less Prone to Oxidation
Methionine residues exhibit different degrees of susceptibility to oxidation. Although solvent accessibility is a relevant factor, oxidation at particular sites cannot be unequivocally explained by accessibility alone. To explore other possible structural determinants, we assembled different sets of...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4657052/ https://www.ncbi.nlm.nih.gov/pubmed/26597773 http://dx.doi.org/10.1038/srep16955 |
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author | Aledo, Juan C. Cantón, Francisco R. Veredas, Francisco J. |
author_facet | Aledo, Juan C. Cantón, Francisco R. Veredas, Francisco J. |
author_sort | Aledo, Juan C. |
collection | PubMed |
description | Methionine residues exhibit different degrees of susceptibility to oxidation. Although solvent accessibility is a relevant factor, oxidation at particular sites cannot be unequivocally explained by accessibility alone. To explore other possible structural determinants, we assembled different sets of oxidation-sensitive and oxidation-resistant methionines contained in human proteins. Comparisons of the proteins containing oxidized methionines with all proteins in the human proteome led to the conclusion that the former exhibit a significantly higher mean value of methionine content than the latter. Within a given protein, an examination of the sequence surrounding the non-oxidized methionine revealed a preference for neighbouring tyrosine and tryptophan residues, but not for phenylalanine residues. However, because the interaction between sulphur atoms and aromatic residues has been reported to be important for the stabilization of protein structure, we carried out an analysis of the spatial interatomic distances between methionines and aromatic residues, including phenylalanine. The results of these analyses uncovered a new determinant for methionine oxidation: the S-aromatic motif, which decreases the reactivity of the involved sulphur towards oxidants. |
format | Online Article Text |
id | pubmed-4657052 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-46570522015-11-30 Sulphur Atoms from Methionines Interacting with Aromatic Residues Are Less Prone to Oxidation Aledo, Juan C. Cantón, Francisco R. Veredas, Francisco J. Sci Rep Article Methionine residues exhibit different degrees of susceptibility to oxidation. Although solvent accessibility is a relevant factor, oxidation at particular sites cannot be unequivocally explained by accessibility alone. To explore other possible structural determinants, we assembled different sets of oxidation-sensitive and oxidation-resistant methionines contained in human proteins. Comparisons of the proteins containing oxidized methionines with all proteins in the human proteome led to the conclusion that the former exhibit a significantly higher mean value of methionine content than the latter. Within a given protein, an examination of the sequence surrounding the non-oxidized methionine revealed a preference for neighbouring tyrosine and tryptophan residues, but not for phenylalanine residues. However, because the interaction between sulphur atoms and aromatic residues has been reported to be important for the stabilization of protein structure, we carried out an analysis of the spatial interatomic distances between methionines and aromatic residues, including phenylalanine. The results of these analyses uncovered a new determinant for methionine oxidation: the S-aromatic motif, which decreases the reactivity of the involved sulphur towards oxidants. Nature Publishing Group 2015-11-24 /pmc/articles/PMC4657052/ /pubmed/26597773 http://dx.doi.org/10.1038/srep16955 Text en Copyright © 2015, Macmillan Publishers Limited http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Aledo, Juan C. Cantón, Francisco R. Veredas, Francisco J. Sulphur Atoms from Methionines Interacting with Aromatic Residues Are Less Prone to Oxidation |
title | Sulphur Atoms from Methionines Interacting with Aromatic Residues Are Less Prone to
Oxidation |
title_full | Sulphur Atoms from Methionines Interacting with Aromatic Residues Are Less Prone to
Oxidation |
title_fullStr | Sulphur Atoms from Methionines Interacting with Aromatic Residues Are Less Prone to
Oxidation |
title_full_unstemmed | Sulphur Atoms from Methionines Interacting with Aromatic Residues Are Less Prone to
Oxidation |
title_short | Sulphur Atoms from Methionines Interacting with Aromatic Residues Are Less Prone to
Oxidation |
title_sort | sulphur atoms from methionines interacting with aromatic residues are less prone to
oxidation |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4657052/ https://www.ncbi.nlm.nih.gov/pubmed/26597773 http://dx.doi.org/10.1038/srep16955 |
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