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Complete genome sequence of bacteriophage P26218 infecting Rhodoferax sp. strain IMCC26218
Bacteriophage P26218 is a virus that thrives in freshwater and infects Rhodoferax sp. strain IMCC26218, both of which were isolated from Soyang Lake, Korea. The bacterial host, IMCC26218, belongs to the genus Rhodoferax and is closely related to R. saidenbachensis, with 98.7 % 16S rRNA gene sequence...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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BioMed Central
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4657236/ https://www.ncbi.nlm.nih.gov/pubmed/26605005 http://dx.doi.org/10.1186/s40793-015-0090-1 |
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author | Moon, Kira Kang, Ilnam Kim, Suhyun Cho, Jang-Cheon Kim, Sang-Jong |
author_facet | Moon, Kira Kang, Ilnam Kim, Suhyun Cho, Jang-Cheon Kim, Sang-Jong |
author_sort | Moon, Kira |
collection | PubMed |
description | Bacteriophage P26218 is a virus that thrives in freshwater and infects Rhodoferax sp. strain IMCC26218, both of which were isolated from Soyang Lake, Korea. The bacterial host, IMCC26218, belongs to the genus Rhodoferax and is closely related to R. saidenbachensis, with 98.7 % 16S rRNA gene sequence similarity. Bacteriophage P26218 has an icosahedral head structure with a diameter of ~52 nm and short tail of ~9 nm, which is a typical morphology of the Podoviridae family. Its complete dsDNA genome was 36,315 bp with 56.7 % G + C content. This is the first genome sequence reported for a lytic phage of the genus Rhodoferax. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s40793-015-0090-1) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-4657236 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-46572362015-11-25 Complete genome sequence of bacteriophage P26218 infecting Rhodoferax sp. strain IMCC26218 Moon, Kira Kang, Ilnam Kim, Suhyun Cho, Jang-Cheon Kim, Sang-Jong Stand Genomic Sci Short Genome Report Bacteriophage P26218 is a virus that thrives in freshwater and infects Rhodoferax sp. strain IMCC26218, both of which were isolated from Soyang Lake, Korea. The bacterial host, IMCC26218, belongs to the genus Rhodoferax and is closely related to R. saidenbachensis, with 98.7 % 16S rRNA gene sequence similarity. Bacteriophage P26218 has an icosahedral head structure with a diameter of ~52 nm and short tail of ~9 nm, which is a typical morphology of the Podoviridae family. Its complete dsDNA genome was 36,315 bp with 56.7 % G + C content. This is the first genome sequence reported for a lytic phage of the genus Rhodoferax. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s40793-015-0090-1) contains supplementary material, which is available to authorized users. BioMed Central 2015-11-24 /pmc/articles/PMC4657236/ /pubmed/26605005 http://dx.doi.org/10.1186/s40793-015-0090-1 Text en © Moon et al. 2015 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Short Genome Report Moon, Kira Kang, Ilnam Kim, Suhyun Cho, Jang-Cheon Kim, Sang-Jong Complete genome sequence of bacteriophage P26218 infecting Rhodoferax sp. strain IMCC26218 |
title | Complete genome sequence of bacteriophage P26218 infecting Rhodoferax sp. strain IMCC26218 |
title_full | Complete genome sequence of bacteriophage P26218 infecting Rhodoferax sp. strain IMCC26218 |
title_fullStr | Complete genome sequence of bacteriophage P26218 infecting Rhodoferax sp. strain IMCC26218 |
title_full_unstemmed | Complete genome sequence of bacteriophage P26218 infecting Rhodoferax sp. strain IMCC26218 |
title_short | Complete genome sequence of bacteriophage P26218 infecting Rhodoferax sp. strain IMCC26218 |
title_sort | complete genome sequence of bacteriophage p26218 infecting rhodoferax sp. strain imcc26218 |
topic | Short Genome Report |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4657236/ https://www.ncbi.nlm.nih.gov/pubmed/26605005 http://dx.doi.org/10.1186/s40793-015-0090-1 |
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