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Tile-Based Two-Dimensional Phase Unwrapping for Digital Holography Using a Modular Framework

A variety of physical and biomedical imaging techniques, such as digital holography, interferometric synthetic aperture radar (InSAR), or magnetic resonance imaging (MRI) enable measurement of the phase of a physical quantity additionally to its amplitude. However, the phase can commonly only be mea...

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Autores principales: Antonopoulos, Georgios C., Steltner, Benjamin, Heisterkamp, Alexander, Ripken, Tammo, Meyer, Heiko
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4657957/
https://www.ncbi.nlm.nih.gov/pubmed/26599984
http://dx.doi.org/10.1371/journal.pone.0143186
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author Antonopoulos, Georgios C.
Steltner, Benjamin
Heisterkamp, Alexander
Ripken, Tammo
Meyer, Heiko
author_facet Antonopoulos, Georgios C.
Steltner, Benjamin
Heisterkamp, Alexander
Ripken, Tammo
Meyer, Heiko
author_sort Antonopoulos, Georgios C.
collection PubMed
description A variety of physical and biomedical imaging techniques, such as digital holography, interferometric synthetic aperture radar (InSAR), or magnetic resonance imaging (MRI) enable measurement of the phase of a physical quantity additionally to its amplitude. However, the phase can commonly only be measured modulo 2π, as a so called wrapped phase map. Phase unwrapping is the process of obtaining the underlying physical phase map from the wrapped phase. Tile-based phase unwrapping algorithms operate by first tessellating the phase map, then unwrapping individual tiles, and finally merging them to a continuous phase map. They can be implemented computationally efficiently and are robust to noise. However, they are prone to failure in the presence of phase residues or erroneous unwraps of single tiles. We tried to overcome these shortcomings by creating novel tile unwrapping and merging algorithms as well as creating a framework that allows to combine them in modular fashion. To increase the robustness of the tile unwrapping step, we implemented a model-based algorithm that makes efficient use of linear algebra to unwrap individual tiles. Furthermore, we adapted an established pixel-based unwrapping algorithm to create a quality guided tile merger. These original algorithms as well as previously existing ones were implemented in a modular phase unwrapping C++ framework. By examining different combinations of unwrapping and merging algorithms we compared our method to existing approaches. We could show that the appropriate choice of unwrapping and merging algorithms can significantly improve the unwrapped result in the presence of phase residues and noise. Beyond that, our modular framework allows for efficient design and test of new tile-based phase unwrapping algorithms. The software developed in this study is freely available.
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spelling pubmed-46579572015-12-02 Tile-Based Two-Dimensional Phase Unwrapping for Digital Holography Using a Modular Framework Antonopoulos, Georgios C. Steltner, Benjamin Heisterkamp, Alexander Ripken, Tammo Meyer, Heiko PLoS One Research Article A variety of physical and biomedical imaging techniques, such as digital holography, interferometric synthetic aperture radar (InSAR), or magnetic resonance imaging (MRI) enable measurement of the phase of a physical quantity additionally to its amplitude. However, the phase can commonly only be measured modulo 2π, as a so called wrapped phase map. Phase unwrapping is the process of obtaining the underlying physical phase map from the wrapped phase. Tile-based phase unwrapping algorithms operate by first tessellating the phase map, then unwrapping individual tiles, and finally merging them to a continuous phase map. They can be implemented computationally efficiently and are robust to noise. However, they are prone to failure in the presence of phase residues or erroneous unwraps of single tiles. We tried to overcome these shortcomings by creating novel tile unwrapping and merging algorithms as well as creating a framework that allows to combine them in modular fashion. To increase the robustness of the tile unwrapping step, we implemented a model-based algorithm that makes efficient use of linear algebra to unwrap individual tiles. Furthermore, we adapted an established pixel-based unwrapping algorithm to create a quality guided tile merger. These original algorithms as well as previously existing ones were implemented in a modular phase unwrapping C++ framework. By examining different combinations of unwrapping and merging algorithms we compared our method to existing approaches. We could show that the appropriate choice of unwrapping and merging algorithms can significantly improve the unwrapped result in the presence of phase residues and noise. Beyond that, our modular framework allows for efficient design and test of new tile-based phase unwrapping algorithms. The software developed in this study is freely available. Public Library of Science 2015-11-24 /pmc/articles/PMC4657957/ /pubmed/26599984 http://dx.doi.org/10.1371/journal.pone.0143186 Text en © 2015 Antonopoulos et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Antonopoulos, Georgios C.
Steltner, Benjamin
Heisterkamp, Alexander
Ripken, Tammo
Meyer, Heiko
Tile-Based Two-Dimensional Phase Unwrapping for Digital Holography Using a Modular Framework
title Tile-Based Two-Dimensional Phase Unwrapping for Digital Holography Using a Modular Framework
title_full Tile-Based Two-Dimensional Phase Unwrapping for Digital Holography Using a Modular Framework
title_fullStr Tile-Based Two-Dimensional Phase Unwrapping for Digital Holography Using a Modular Framework
title_full_unstemmed Tile-Based Two-Dimensional Phase Unwrapping for Digital Holography Using a Modular Framework
title_short Tile-Based Two-Dimensional Phase Unwrapping for Digital Holography Using a Modular Framework
title_sort tile-based two-dimensional phase unwrapping for digital holography using a modular framework
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4657957/
https://www.ncbi.nlm.nih.gov/pubmed/26599984
http://dx.doi.org/10.1371/journal.pone.0143186
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