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Identification of General and Heart-Specific miRNAs in Sheep (Ovis aries)

MicroRNAs (miRNAs or miRs) are small regulatory RNAs crucial for modulation of signaling pathways in multiple organs. While the link between miRNAs and heart disease has grown more readily apparent over the past three years, these data are primarily limited to small animal models or cell-based syste...

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Autores principales: Laganà, Alessandro, Veneziano, Dario, Spata, Tyler, Tang, Richard, Zhu, Hua, Mohler, Peter J., Kilic, Ahmet
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4657999/
https://www.ncbi.nlm.nih.gov/pubmed/26599010
http://dx.doi.org/10.1371/journal.pone.0143313
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author Laganà, Alessandro
Veneziano, Dario
Spata, Tyler
Tang, Richard
Zhu, Hua
Mohler, Peter J.
Kilic, Ahmet
author_facet Laganà, Alessandro
Veneziano, Dario
Spata, Tyler
Tang, Richard
Zhu, Hua
Mohler, Peter J.
Kilic, Ahmet
author_sort Laganà, Alessandro
collection PubMed
description MicroRNAs (miRNAs or miRs) are small regulatory RNAs crucial for modulation of signaling pathways in multiple organs. While the link between miRNAs and heart disease has grown more readily apparent over the past three years, these data are primarily limited to small animal models or cell-based systems. Here, we performed a high-throughput RNA sequencing (RNAseq) analysis of left ventricle and other tissue from a pre-clinical ovine model. We identified 172 novel miRNA precursors encoding a total of 264 mature miRNAs. Notably, 84 precursors were detected in both the left ventricle and other tissues. However, 10 precursors, encoding 11 mature sequences, were specific to the left ventricle. Moreover, the total 168 novel miRNA precursors included 22 non-conserved ovine-specific sequences. Our data identify and characterize novel miRNAs in the left ventricle of sheep, providing fundamental new information for our understanding of protein regulation in heart and other tissues.
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spelling pubmed-46579992015-12-02 Identification of General and Heart-Specific miRNAs in Sheep (Ovis aries) Laganà, Alessandro Veneziano, Dario Spata, Tyler Tang, Richard Zhu, Hua Mohler, Peter J. Kilic, Ahmet PLoS One Research Article MicroRNAs (miRNAs or miRs) are small regulatory RNAs crucial for modulation of signaling pathways in multiple organs. While the link between miRNAs and heart disease has grown more readily apparent over the past three years, these data are primarily limited to small animal models or cell-based systems. Here, we performed a high-throughput RNA sequencing (RNAseq) analysis of left ventricle and other tissue from a pre-clinical ovine model. We identified 172 novel miRNA precursors encoding a total of 264 mature miRNAs. Notably, 84 precursors were detected in both the left ventricle and other tissues. However, 10 precursors, encoding 11 mature sequences, were specific to the left ventricle. Moreover, the total 168 novel miRNA precursors included 22 non-conserved ovine-specific sequences. Our data identify and characterize novel miRNAs in the left ventricle of sheep, providing fundamental new information for our understanding of protein regulation in heart and other tissues. Public Library of Science 2015-11-24 /pmc/articles/PMC4657999/ /pubmed/26599010 http://dx.doi.org/10.1371/journal.pone.0143313 Text en © 2015 Laganà et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Laganà, Alessandro
Veneziano, Dario
Spata, Tyler
Tang, Richard
Zhu, Hua
Mohler, Peter J.
Kilic, Ahmet
Identification of General and Heart-Specific miRNAs in Sheep (Ovis aries)
title Identification of General and Heart-Specific miRNAs in Sheep (Ovis aries)
title_full Identification of General and Heart-Specific miRNAs in Sheep (Ovis aries)
title_fullStr Identification of General and Heart-Specific miRNAs in Sheep (Ovis aries)
title_full_unstemmed Identification of General and Heart-Specific miRNAs in Sheep (Ovis aries)
title_short Identification of General and Heart-Specific miRNAs in Sheep (Ovis aries)
title_sort identification of general and heart-specific mirnas in sheep (ovis aries)
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4657999/
https://www.ncbi.nlm.nih.gov/pubmed/26599010
http://dx.doi.org/10.1371/journal.pone.0143313
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