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Functional prediction of hypothetical proteins in human adenoviruses
Assigning functional information to hypothetical proteins in virus genomes is crucial for gaining insight into their proteomes. Human adenoviruses are medium sized viruses that cause a range of diseases. Their genomes possess proteins with uncharacterized function known as hypothetical proteins. Usi...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Biomedical Informatics
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4658645/ https://www.ncbi.nlm.nih.gov/pubmed/26664031 http://dx.doi.org/10.6026/97320630011466 |
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author | Dorden, Shane Mahadevan, Padmanabhan |
author_facet | Dorden, Shane Mahadevan, Padmanabhan |
author_sort | Dorden, Shane |
collection | PubMed |
description | Assigning functional information to hypothetical proteins in virus genomes is crucial for gaining insight into their proteomes. Human adenoviruses are medium sized viruses that cause a range of diseases. Their genomes possess proteins with uncharacterized function known as hypothetical proteins. Using a wide range of protein function prediction servers, functional information was obtained about these hypothetical proteins. A comparison of functional information obtained from these servers revealed that some of them produced functional information, while others provided little functional information about these human adenovirus hypothetical proteins. The PFP, ESG, PSIPRED, 3d2GO, and ProtFun servers produced the most functional information regarding these hypothetical proteins. |
format | Online Article Text |
id | pubmed-4658645 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Biomedical Informatics |
record_format | MEDLINE/PubMed |
spelling | pubmed-46586452015-12-09 Functional prediction of hypothetical proteins in human adenoviruses Dorden, Shane Mahadevan, Padmanabhan Bioinformation Hypothesis Assigning functional information to hypothetical proteins in virus genomes is crucial for gaining insight into their proteomes. Human adenoviruses are medium sized viruses that cause a range of diseases. Their genomes possess proteins with uncharacterized function known as hypothetical proteins. Using a wide range of protein function prediction servers, functional information was obtained about these hypothetical proteins. A comparison of functional information obtained from these servers revealed that some of them produced functional information, while others provided little functional information about these human adenovirus hypothetical proteins. The PFP, ESG, PSIPRED, 3d2GO, and ProtFun servers produced the most functional information regarding these hypothetical proteins. Biomedical Informatics 2015-10-31 /pmc/articles/PMC4658645/ /pubmed/26664031 http://dx.doi.org/10.6026/97320630011466 Text en © 2015 Biomedical Informatics This is an Open Access article which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. This is distributed under the terms of the Creative Commons Attribution License. |
spellingShingle | Hypothesis Dorden, Shane Mahadevan, Padmanabhan Functional prediction of hypothetical proteins in human adenoviruses |
title | Functional prediction of hypothetical proteins in human adenoviruses |
title_full | Functional prediction of hypothetical proteins in human adenoviruses |
title_fullStr | Functional prediction of hypothetical proteins in human adenoviruses |
title_full_unstemmed | Functional prediction of hypothetical proteins in human adenoviruses |
title_short | Functional prediction of hypothetical proteins in human adenoviruses |
title_sort | functional prediction of hypothetical proteins in human adenoviruses |
topic | Hypothesis |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4658645/ https://www.ncbi.nlm.nih.gov/pubmed/26664031 http://dx.doi.org/10.6026/97320630011466 |
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