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Rough set theory based prognostic classification models for hospice referral
BACKGROUND: This paper explores and evaluates the application of classical and dominance-based rough set theory (RST) for the development of data-driven prognostic classification models for hospice referral. In this work, rough set based models are compared with other data-driven methods with respec...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4659220/ https://www.ncbi.nlm.nih.gov/pubmed/26606986 http://dx.doi.org/10.1186/s12911-015-0216-9 |
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author | Gil-Herrera, Eleazar Aden-Buie, Garrick Yalcin, Ali Tsalatsanis, Athanasios Barnes, Laura E. Djulbegovic, Benjamin |
author_facet | Gil-Herrera, Eleazar Aden-Buie, Garrick Yalcin, Ali Tsalatsanis, Athanasios Barnes, Laura E. Djulbegovic, Benjamin |
author_sort | Gil-Herrera, Eleazar |
collection | PubMed |
description | BACKGROUND: This paper explores and evaluates the application of classical and dominance-based rough set theory (RST) for the development of data-driven prognostic classification models for hospice referral. In this work, rough set based models are compared with other data-driven methods with respect to two factors related to clinical credibility: accuracy and accessibility. Accessibility refers to the ability of the model to provide traceable, interpretable results and use data that is relevant and simple to collect. METHODS: We utilize retrospective data from 9,103 terminally ill patients to demonstrate the design and implementation RST- based models to identify potential hospice candidates. The classical rough set approach (CRSA) provides methods for knowledge acquisition, founded on the relational indiscernibility of objects in a decision table, to describe required conditions for membership in a concept class. On the other hand, the dominance-based rough set approach (DRSA) analyzes information based on the monotonic relationships between condition attributes values and their assignment to the decision class. CRSA decision rules for six-month patient survival classification were induced using the MODLEM algorithm. Dominance-based decision rules were extracted using the VC-DomLEM rule induction algorithm. RESULTS: The RST-based classifiers are compared with other predictive and rule based decision modeling techniques, namely logistic regression, support vector machines, random forests and C4.5. The RST-based classifiers demonstrate average AUC of 69.74 % with MODLEM and 71.73 % with VC-DomLEM, while the compared methods achieve average AUC of 74.21 % for logistic regression, 73.52 % for support vector machines, 74.59 % for random forests, and 70.88 % for C4.5. CONCLUSIONS: This paper contributes to the growing body of research in RST-based prognostic models. RST and its extensions posses features that enhance the accessibility of clinical decision support models. While the non-rule-based methods—logistic regression, support vector machines and random forests—were found to achieve higher AUC, the performance differential may be outweighed by the benefits of the rule-based methods, particularly in the case of VC-DomLEM. Developing prognostic models for hospice referrals is a challenging problem resulting in substandard performance for all of the evaluated classification methods. |
format | Online Article Text |
id | pubmed-4659220 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-46592202015-11-26 Rough set theory based prognostic classification models for hospice referral Gil-Herrera, Eleazar Aden-Buie, Garrick Yalcin, Ali Tsalatsanis, Athanasios Barnes, Laura E. Djulbegovic, Benjamin BMC Med Inform Decis Mak Research Article BACKGROUND: This paper explores and evaluates the application of classical and dominance-based rough set theory (RST) for the development of data-driven prognostic classification models for hospice referral. In this work, rough set based models are compared with other data-driven methods with respect to two factors related to clinical credibility: accuracy and accessibility. Accessibility refers to the ability of the model to provide traceable, interpretable results and use data that is relevant and simple to collect. METHODS: We utilize retrospective data from 9,103 terminally ill patients to demonstrate the design and implementation RST- based models to identify potential hospice candidates. The classical rough set approach (CRSA) provides methods for knowledge acquisition, founded on the relational indiscernibility of objects in a decision table, to describe required conditions for membership in a concept class. On the other hand, the dominance-based rough set approach (DRSA) analyzes information based on the monotonic relationships between condition attributes values and their assignment to the decision class. CRSA decision rules for six-month patient survival classification were induced using the MODLEM algorithm. Dominance-based decision rules were extracted using the VC-DomLEM rule induction algorithm. RESULTS: The RST-based classifiers are compared with other predictive and rule based decision modeling techniques, namely logistic regression, support vector machines, random forests and C4.5. The RST-based classifiers demonstrate average AUC of 69.74 % with MODLEM and 71.73 % with VC-DomLEM, while the compared methods achieve average AUC of 74.21 % for logistic regression, 73.52 % for support vector machines, 74.59 % for random forests, and 70.88 % for C4.5. CONCLUSIONS: This paper contributes to the growing body of research in RST-based prognostic models. RST and its extensions posses features that enhance the accessibility of clinical decision support models. While the non-rule-based methods—logistic regression, support vector machines and random forests—were found to achieve higher AUC, the performance differential may be outweighed by the benefits of the rule-based methods, particularly in the case of VC-DomLEM. Developing prognostic models for hospice referrals is a challenging problem resulting in substandard performance for all of the evaluated classification methods. BioMed Central 2015-11-25 /pmc/articles/PMC4659220/ /pubmed/26606986 http://dx.doi.org/10.1186/s12911-015-0216-9 Text en © Gil-Herrera et al. 2015 Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0 International License(http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver(http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Article Gil-Herrera, Eleazar Aden-Buie, Garrick Yalcin, Ali Tsalatsanis, Athanasios Barnes, Laura E. Djulbegovic, Benjamin Rough set theory based prognostic classification models for hospice referral |
title | Rough set theory based prognostic classification models for hospice referral |
title_full | Rough set theory based prognostic classification models for hospice referral |
title_fullStr | Rough set theory based prognostic classification models for hospice referral |
title_full_unstemmed | Rough set theory based prognostic classification models for hospice referral |
title_short | Rough set theory based prognostic classification models for hospice referral |
title_sort | rough set theory based prognostic classification models for hospice referral |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4659220/ https://www.ncbi.nlm.nih.gov/pubmed/26606986 http://dx.doi.org/10.1186/s12911-015-0216-9 |
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