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Rough set theory based prognostic classification models for hospice referral

BACKGROUND: This paper explores and evaluates the application of classical and dominance-based rough set theory (RST) for the development of data-driven prognostic classification models for hospice referral. In this work, rough set based models are compared with other data-driven methods with respec...

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Autores principales: Gil-Herrera, Eleazar, Aden-Buie, Garrick, Yalcin, Ali, Tsalatsanis, Athanasios, Barnes, Laura E., Djulbegovic, Benjamin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4659220/
https://www.ncbi.nlm.nih.gov/pubmed/26606986
http://dx.doi.org/10.1186/s12911-015-0216-9
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author Gil-Herrera, Eleazar
Aden-Buie, Garrick
Yalcin, Ali
Tsalatsanis, Athanasios
Barnes, Laura E.
Djulbegovic, Benjamin
author_facet Gil-Herrera, Eleazar
Aden-Buie, Garrick
Yalcin, Ali
Tsalatsanis, Athanasios
Barnes, Laura E.
Djulbegovic, Benjamin
author_sort Gil-Herrera, Eleazar
collection PubMed
description BACKGROUND: This paper explores and evaluates the application of classical and dominance-based rough set theory (RST) for the development of data-driven prognostic classification models for hospice referral. In this work, rough set based models are compared with other data-driven methods with respect to two factors related to clinical credibility: accuracy and accessibility. Accessibility refers to the ability of the model to provide traceable, interpretable results and use data that is relevant and simple to collect. METHODS: We utilize retrospective data from 9,103 terminally ill patients to demonstrate the design and implementation RST- based models to identify potential hospice candidates. The classical rough set approach (CRSA) provides methods for knowledge acquisition, founded on the relational indiscernibility of objects in a decision table, to describe required conditions for membership in a concept class. On the other hand, the dominance-based rough set approach (DRSA) analyzes information based on the monotonic relationships between condition attributes values and their assignment to the decision class. CRSA decision rules for six-month patient survival classification were induced using the MODLEM algorithm. Dominance-based decision rules were extracted using the VC-DomLEM rule induction algorithm. RESULTS: The RST-based classifiers are compared with other predictive and rule based decision modeling techniques, namely logistic regression, support vector machines, random forests and C4.5. The RST-based classifiers demonstrate average AUC of 69.74 % with MODLEM and 71.73 % with VC-DomLEM, while the compared methods achieve average AUC of 74.21 % for logistic regression, 73.52 % for support vector machines, 74.59 % for random forests, and 70.88 % for C4.5. CONCLUSIONS: This paper contributes to the growing body of research in RST-based prognostic models. RST and its extensions posses features that enhance the accessibility of clinical decision support models. While the non-rule-based methods—logistic regression, support vector machines and random forests—were found to achieve higher AUC, the performance differential may be outweighed by the benefits of the rule-based methods, particularly in the case of VC-DomLEM. Developing prognostic models for hospice referrals is a challenging problem resulting in substandard performance for all of the evaluated classification methods.
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spelling pubmed-46592202015-11-26 Rough set theory based prognostic classification models for hospice referral Gil-Herrera, Eleazar Aden-Buie, Garrick Yalcin, Ali Tsalatsanis, Athanasios Barnes, Laura E. Djulbegovic, Benjamin BMC Med Inform Decis Mak Research Article BACKGROUND: This paper explores and evaluates the application of classical and dominance-based rough set theory (RST) for the development of data-driven prognostic classification models for hospice referral. In this work, rough set based models are compared with other data-driven methods with respect to two factors related to clinical credibility: accuracy and accessibility. Accessibility refers to the ability of the model to provide traceable, interpretable results and use data that is relevant and simple to collect. METHODS: We utilize retrospective data from 9,103 terminally ill patients to demonstrate the design and implementation RST- based models to identify potential hospice candidates. The classical rough set approach (CRSA) provides methods for knowledge acquisition, founded on the relational indiscernibility of objects in a decision table, to describe required conditions for membership in a concept class. On the other hand, the dominance-based rough set approach (DRSA) analyzes information based on the monotonic relationships between condition attributes values and their assignment to the decision class. CRSA decision rules for six-month patient survival classification were induced using the MODLEM algorithm. Dominance-based decision rules were extracted using the VC-DomLEM rule induction algorithm. RESULTS: The RST-based classifiers are compared with other predictive and rule based decision modeling techniques, namely logistic regression, support vector machines, random forests and C4.5. The RST-based classifiers demonstrate average AUC of 69.74 % with MODLEM and 71.73 % with VC-DomLEM, while the compared methods achieve average AUC of 74.21 % for logistic regression, 73.52 % for support vector machines, 74.59 % for random forests, and 70.88 % for C4.5. CONCLUSIONS: This paper contributes to the growing body of research in RST-based prognostic models. RST and its extensions posses features that enhance the accessibility of clinical decision support models. While the non-rule-based methods—logistic regression, support vector machines and random forests—were found to achieve higher AUC, the performance differential may be outweighed by the benefits of the rule-based methods, particularly in the case of VC-DomLEM. Developing prognostic models for hospice referrals is a challenging problem resulting in substandard performance for all of the evaluated classification methods. BioMed Central 2015-11-25 /pmc/articles/PMC4659220/ /pubmed/26606986 http://dx.doi.org/10.1186/s12911-015-0216-9 Text en © Gil-Herrera et al. 2015 Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0 International License(http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver(http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research Article
Gil-Herrera, Eleazar
Aden-Buie, Garrick
Yalcin, Ali
Tsalatsanis, Athanasios
Barnes, Laura E.
Djulbegovic, Benjamin
Rough set theory based prognostic classification models for hospice referral
title Rough set theory based prognostic classification models for hospice referral
title_full Rough set theory based prognostic classification models for hospice referral
title_fullStr Rough set theory based prognostic classification models for hospice referral
title_full_unstemmed Rough set theory based prognostic classification models for hospice referral
title_short Rough set theory based prognostic classification models for hospice referral
title_sort rough set theory based prognostic classification models for hospice referral
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4659220/
https://www.ncbi.nlm.nih.gov/pubmed/26606986
http://dx.doi.org/10.1186/s12911-015-0216-9
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