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Progress and prospects of next-generation sequencing testing for inherited retinal dystrophy

Next-generation sequencing, also known as massively paralleled sequencing, offers an unprecedented opportunity to study disease mechanisms of inherited retinal dystrophies: a dramatic change from a few years ago. The specific involvement of the retina and the manageable number of genes to sequence m...

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Autores principales: Chiang, John (Pei-Wen), Lamey, Tina, McLaren, Terri, Thompson, Jennifer A, Montgomery, Hannah, De Roach, John
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Informa Healthcare 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4659341/
https://www.ncbi.nlm.nih.gov/pubmed/26394700
http://dx.doi.org/10.1586/14737159.2015.1081057
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author Chiang, John (Pei-Wen)
Lamey, Tina
McLaren, Terri
Thompson, Jennifer A
Montgomery, Hannah
De Roach, John
author_facet Chiang, John (Pei-Wen)
Lamey, Tina
McLaren, Terri
Thompson, Jennifer A
Montgomery, Hannah
De Roach, John
author_sort Chiang, John (Pei-Wen)
collection PubMed
description Next-generation sequencing, also known as massively paralleled sequencing, offers an unprecedented opportunity to study disease mechanisms of inherited retinal dystrophies: a dramatic change from a few years ago. The specific involvement of the retina and the manageable number of genes to sequence make inherited retinal dystrophies an attractive model to study genotype–phenotype correlations. Costs are reducing rapidly and the current overall mutation detection rate of approximately 60% offers real potential for personalized medicine and treatments. This report addresses the challenges ahead, which include: better understanding of the mutation mechanisms of syndromic genes in apparent non-syndromic patients; finding mutations in patients who have tested negative or inconclusive; better variant calling, especially for intronic and synonymous variants; more precise genotype–phenotype correlations and making genetic testing more broadly accessible.
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spelling pubmed-46593412015-12-10 Progress and prospects of next-generation sequencing testing for inherited retinal dystrophy Chiang, John (Pei-Wen) Lamey, Tina McLaren, Terri Thompson, Jennifer A Montgomery, Hannah De Roach, John Expert Rev Mol Diagn Special Report Next-generation sequencing, also known as massively paralleled sequencing, offers an unprecedented opportunity to study disease mechanisms of inherited retinal dystrophies: a dramatic change from a few years ago. The specific involvement of the retina and the manageable number of genes to sequence make inherited retinal dystrophies an attractive model to study genotype–phenotype correlations. Costs are reducing rapidly and the current overall mutation detection rate of approximately 60% offers real potential for personalized medicine and treatments. This report addresses the challenges ahead, which include: better understanding of the mutation mechanisms of syndromic genes in apparent non-syndromic patients; finding mutations in patients who have tested negative or inconclusive; better variant calling, especially for intronic and synonymous variants; more precise genotype–phenotype correlations and making genetic testing more broadly accessible. Informa Healthcare 2015-10-03 2015-08-24 /pmc/articles/PMC4659341/ /pubmed/26394700 http://dx.doi.org/10.1586/14737159.2015.1081057 Text en © 2015 The Author(s). Published by Taylor & Francis http://creativecommons.org/Licenses/by-nc-nd/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivatives License (http://creativecommons.org/Licenses/by-nc-nd/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited, and is not altered, transformed, or built upon in any way.
spellingShingle Special Report
Chiang, John (Pei-Wen)
Lamey, Tina
McLaren, Terri
Thompson, Jennifer A
Montgomery, Hannah
De Roach, John
Progress and prospects of next-generation sequencing testing for inherited retinal dystrophy
title Progress and prospects of next-generation sequencing testing for inherited retinal dystrophy
title_full Progress and prospects of next-generation sequencing testing for inherited retinal dystrophy
title_fullStr Progress and prospects of next-generation sequencing testing for inherited retinal dystrophy
title_full_unstemmed Progress and prospects of next-generation sequencing testing for inherited retinal dystrophy
title_short Progress and prospects of next-generation sequencing testing for inherited retinal dystrophy
title_sort progress and prospects of next-generation sequencing testing for inherited retinal dystrophy
topic Special Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4659341/
https://www.ncbi.nlm.nih.gov/pubmed/26394700
http://dx.doi.org/10.1586/14737159.2015.1081057
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