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Progress and prospects of next-generation sequencing testing for inherited retinal dystrophy
Next-generation sequencing, also known as massively paralleled sequencing, offers an unprecedented opportunity to study disease mechanisms of inherited retinal dystrophies: a dramatic change from a few years ago. The specific involvement of the retina and the manageable number of genes to sequence m...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Informa Healthcare
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4659341/ https://www.ncbi.nlm.nih.gov/pubmed/26394700 http://dx.doi.org/10.1586/14737159.2015.1081057 |
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author | Chiang, John (Pei-Wen) Lamey, Tina McLaren, Terri Thompson, Jennifer A Montgomery, Hannah De Roach, John |
author_facet | Chiang, John (Pei-Wen) Lamey, Tina McLaren, Terri Thompson, Jennifer A Montgomery, Hannah De Roach, John |
author_sort | Chiang, John (Pei-Wen) |
collection | PubMed |
description | Next-generation sequencing, also known as massively paralleled sequencing, offers an unprecedented opportunity to study disease mechanisms of inherited retinal dystrophies: a dramatic change from a few years ago. The specific involvement of the retina and the manageable number of genes to sequence make inherited retinal dystrophies an attractive model to study genotype–phenotype correlations. Costs are reducing rapidly and the current overall mutation detection rate of approximately 60% offers real potential for personalized medicine and treatments. This report addresses the challenges ahead, which include: better understanding of the mutation mechanisms of syndromic genes in apparent non-syndromic patients; finding mutations in patients who have tested negative or inconclusive; better variant calling, especially for intronic and synonymous variants; more precise genotype–phenotype correlations and making genetic testing more broadly accessible. |
format | Online Article Text |
id | pubmed-4659341 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Informa Healthcare |
record_format | MEDLINE/PubMed |
spelling | pubmed-46593412015-12-10 Progress and prospects of next-generation sequencing testing for inherited retinal dystrophy Chiang, John (Pei-Wen) Lamey, Tina McLaren, Terri Thompson, Jennifer A Montgomery, Hannah De Roach, John Expert Rev Mol Diagn Special Report Next-generation sequencing, also known as massively paralleled sequencing, offers an unprecedented opportunity to study disease mechanisms of inherited retinal dystrophies: a dramatic change from a few years ago. The specific involvement of the retina and the manageable number of genes to sequence make inherited retinal dystrophies an attractive model to study genotype–phenotype correlations. Costs are reducing rapidly and the current overall mutation detection rate of approximately 60% offers real potential for personalized medicine and treatments. This report addresses the challenges ahead, which include: better understanding of the mutation mechanisms of syndromic genes in apparent non-syndromic patients; finding mutations in patients who have tested negative or inconclusive; better variant calling, especially for intronic and synonymous variants; more precise genotype–phenotype correlations and making genetic testing more broadly accessible. Informa Healthcare 2015-10-03 2015-08-24 /pmc/articles/PMC4659341/ /pubmed/26394700 http://dx.doi.org/10.1586/14737159.2015.1081057 Text en © 2015 The Author(s). Published by Taylor & Francis http://creativecommons.org/Licenses/by-nc-nd/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivatives License (http://creativecommons.org/Licenses/by-nc-nd/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited, and is not altered, transformed, or built upon in any way. |
spellingShingle | Special Report Chiang, John (Pei-Wen) Lamey, Tina McLaren, Terri Thompson, Jennifer A Montgomery, Hannah De Roach, John Progress and prospects of next-generation sequencing testing for inherited retinal dystrophy |
title | Progress and prospects of next-generation sequencing testing for inherited retinal dystrophy |
title_full | Progress and prospects of next-generation sequencing testing for inherited retinal dystrophy |
title_fullStr | Progress and prospects of next-generation sequencing testing for inherited retinal dystrophy |
title_full_unstemmed | Progress and prospects of next-generation sequencing testing for inherited retinal dystrophy |
title_short | Progress and prospects of next-generation sequencing testing for inherited retinal dystrophy |
title_sort | progress and prospects of next-generation sequencing testing for inherited retinal dystrophy |
topic | Special Report |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4659341/ https://www.ncbi.nlm.nih.gov/pubmed/26394700 http://dx.doi.org/10.1586/14737159.2015.1081057 |
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