Function analysis of proteins encoded by ORFs 1 to 8 of porcine circovirus-like virus P1 by microarray assay

Porcine circovirus-like agent P1 is a newly discovered virus containing a single-strand circular genome. The genome of P1 is a DNA molecule of 648 nucleotides which contains eight open reading frames (ORFs) that probably encode potential proteins or polypeptides. Thus it is very important to clarify...

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Detalles Bibliográficos
Autores principales: Wen, Libin, Wang, Fengzhi, Zhang, Dan, He, Kongwang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2015
Materias:
Data in Brief
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4664753/
https://www.ncbi.nlm.nih.gov/pubmed/26697373
http://dx.doi.org/10.1016/j.gdata.2015.09.017
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author Wen, Libin
Wang, Fengzhi
Zhang, Dan
He, Kongwang
author_facet Wen, Libin
Wang, Fengzhi
Zhang, Dan
He, Kongwang
author_sort Wen, Libin
collection PubMed
description Porcine circovirus-like agent P1 is a newly discovered virus containing a single-strand circular genome. The genome of P1 is a DNA molecule of 648 nucleotides which contains eight open reading frames (ORFs) that probably encode potential proteins or polypeptides. Thus it is very important to clarify these proteins' function. Here we provide the methods and analysis of microarray data in detail to characterize the transcriptome profile of P1 with and without the ORF. The relevant microarray data sets have been deposited in Gene Expression Omnibus (GEO) database under accession number GSE71945.
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spelling pubmed-46647532015-12-22 Function analysis of proteins encoded by ORFs 1 to 8 of porcine circovirus-like virus P1 by microarray assay Wen, Libin Wang, Fengzhi Zhang, Dan He, Kongwang Genom Data Data in Brief Porcine circovirus-like agent P1 is a newly discovered virus containing a single-strand circular genome. The genome of P1 is a DNA molecule of 648 nucleotides which contains eight open reading frames (ORFs) that probably encode potential proteins or polypeptides. Thus it is very important to clarify these proteins' function. Here we provide the methods and analysis of microarray data in detail to characterize the transcriptome profile of P1 with and without the ORF. The relevant microarray data sets have been deposited in Gene Expression Omnibus (GEO) database under accession number GSE71945. Elsevier 2015-09-18 /pmc/articles/PMC4664753/ /pubmed/26697373 http://dx.doi.org/10.1016/j.gdata.2015.09.017 Text en © 2015 Elsevier Inc. http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Data in Brief
Wen, Libin
Wang, Fengzhi
Zhang, Dan
He, Kongwang
Function analysis of proteins encoded by ORFs 1 to 8 of porcine circovirus-like virus P1 by microarray assay
title Function analysis of proteins encoded by ORFs 1 to 8 of porcine circovirus-like virus P1 by microarray assay
title_full Function analysis of proteins encoded by ORFs 1 to 8 of porcine circovirus-like virus P1 by microarray assay
title_fullStr Function analysis of proteins encoded by ORFs 1 to 8 of porcine circovirus-like virus P1 by microarray assay
title_full_unstemmed Function analysis of proteins encoded by ORFs 1 to 8 of porcine circovirus-like virus P1 by microarray assay
title_short Function analysis of proteins encoded by ORFs 1 to 8 of porcine circovirus-like virus P1 by microarray assay
title_sort function analysis of proteins encoded by orfs 1 to 8 of porcine circovirus-like virus p1 by microarray assay
topic Data in Brief
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4664753/
https://www.ncbi.nlm.nih.gov/pubmed/26697373
http://dx.doi.org/10.1016/j.gdata.2015.09.017
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