Cargando…

Evolution Analysis of Simple Sequence Repeats in Plant Genome

Simple sequence repeats (SSRs) are widespread units on genome sequences, and play many important roles in plants. In order to reveal the evolution of plant genomes, we investigated the evolutionary regularities of SSRs during the evolution of plant species and the plant kingdom by analysis of twelve...

Descripción completa

Detalles Bibliográficos
Autores principales:	Qin, Zhen, Wang, Yanping, Wang, Qingmei, Li, Aixian, Hou, Fuyun, Zhang, Liming
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Public Library of Science 2015
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4668000/ https://www.ncbi.nlm.nih.gov/pubmed/26630570 http://dx.doi.org/10.1371/journal.pone.0144108

Ejemplares similares

Comparative analysis of full-length transcriptomes based on hybrid population reveals regulatory mechanisms of anthocyanin biosynthesis in sweet potato (Ipomoea batatas (L.) Lam)
por: Qin, Zhen, et al.
Publicado: (2020)

Overexpression of 9-cis-Epoxycarotenoid Dioxygenase Gene, IbNCED1, Negatively Regulates Plant Height in Transgenic Sweet Potato
por: Zhou, Yuanyuan, et al.
Publicado: (2023)

Genome-wide in silico identification and expression analysis of beta-galactosidase family members in sweetpotato [Ipomoea batatas (L.) Lam]
por: Hou, Fuyun, et al.
Publicado: (2021)

Differences between nitrogen-tolerant and nitrogen-susceptible sweetpotato cultivars in photosynthate distribution and transport under different nitrogen conditions
por: Duan, Wenxue, et al.
Publicado: (2018)

Survey and analysis of simple sequence repeats (SSRs) present in the genomes of plant viroids
por: Qin, Lü, et al.
Publicado: (2014)

Simple sequence repeats drive genome plasticity and promote adaptive evolution in penaeid shrimp
por: Yuan, Jianbo, et al.
Publicado: (2021)

Comparative Transcriptome Analysis Reveals the Effect of Lignin on Storage Roots Formation in Two Sweetpotato (Ipomoea batatas (L.) Lam.) Cultivars
por: Du, Taifeng, et al.
Publicado: (2023)

Mining of simple sequence repeats in the Genome of Gentianaceae
por: Sathishkumar, R., et al.
Publicado: (2011)

Mapping and analysis of Simple Sequence Repeats in the Arabidopsis thaliana Genome
por: Tamanna, Anwar, et al.
Publicado: (2005)

Pattern and variation in simple sequence repeat (SSR) at different genomic regions and its implications to maize evolution and breeding
por: Zhao, Meiqi, et al.
Publicado: (2023)

Genome-wide characterization of simple sequence repeats in Palmae genomes
por: Manee, Manee M., et al.
Publicado: (2020)

SSRD: Simple Sequence Repeats Database of the Human Genome
por: Subramanian, Subbaya, et al.
Publicado: (2003)

Simple sequence repeat variation in the Daphnia pulex genome
por: Sung, Way, et al.
Publicado: (2010)

In Silico Genome Comparison and Distribution Analysis of Simple Sequences Repeats in Cassava
por: Vásquez, Andrea, et al.
Publicado: (2014)

In- silico exploration of thirty alphavirus genomes for analysis of the simple sequence repeats
por: Alam, Chaudhary Mashhood, et al.
Publicado: (2014)

Distribution and characterization of simple sequence repeats in Gossypium raimondii genome
por: Zou, Changsong, et al.
Publicado: (2012)

Distribution patterns and variation analysis of simple sequence repeats in different genomic regions of bovid genomes
por: Qi, Wen-Hua, et al.
Publicado: (2018)

Characterization of Simple Sequence Repeat (SSR) Markers Mined in Whole Grape Genomes
por: Pei, Dan, et al.
Publicado: (2023)

Cytogenetic Diversity of Simple Sequences Repeats in Morphotypes of Brassica rapa ssp. chinensis
por: Zheng, Jin-shuang, et al.
Publicado: (2016)

Genome-Wide Analysis of Simple Sequence Repeats in Bitter Gourd (Momordica charantia)
por: Cui, Junjie, et al.
Publicado: (2017)

Genome-Wide Analysis of Simple Sequence Repeats in Cabbage (Brassica oleracea L.)
por: Xu, Yuanyuan, et al.
Publicado: (2021)

Genome-wide characterization of simple sequence repeats in Pyrus bretschneideri and their application in an analysis of genetic diversity in pear
por: Xue, Huabai, et al.
Publicado: (2018)

MfSAT: Detect simple sequence repeats in viral genomes
por: Chen, Ming, et al.
Publicado: (2011)

Genetic Diversity in Lens Species Revealed by EST and Genomic Simple Sequence Repeat Analysis
por: Dikshit, Harsh Kumar, et al.
Publicado: (2015)

Comparative genome-wide characterization leading to simple sequence repeat marker development for Nicotiana
por: Wang, Xuewen, et al.
Publicado: (2018)

Simple sequence repeats in Haemophilus influenzae
por: Power, Peter M., et al.
Publicado: (2009)

Comparison and correlation of Simple Sequence Repeats distribution in genomes of Brucella species
por: Kiran, Jangampalli Adi Pradeep, et al.
Publicado: (2011)

Coevolution between simple sequence repeats (SSRs) and virus genome size
por: Zhao, Xiangyan, et al.
Publicado: (2012)

Implications of genome simple sequence repeats signature in 98 Polyomaviridae species
por: Laskar, Rezwanuzzaman, et al.
Publicado: (2021)

Impact of Small Repeat Sequences on Bacterial Genome Evolution
por: Delihas, Nicholas
Publicado: (2011)

Development of Simple Sequence Repeat (SSR) Markers of Sesame (Sesamum indicum) from a Genome Survey
por: Wei, Xin, et al.
Publicado: (2014)

Optimization of sequence alignment for simple sequence repeat regions
por: Jighly, Abdulqader, et al.
Publicado: (2011)

Transcriptome sequencing and simple sequence repeat marker development for three Macaronesian endemic plant species(1)
por: White, Oliver W., et al.
Publicado: (2016)

Large-scale analysis reveals that the genome features of simple sequence repeats are generally conserved at the family level in insects
por: Ding, Simin, et al.
Publicado: (2017)

Genome-wide characterization of simple sequence repeats in cucumber (Cucumis sativus L.)
por: Cavagnaro, Pablo F, et al.
Publicado: (2010)

Characterization of Simple Sequence Repeats (SSRs) in Ciliated Protists Inferred by Comparative Genomics
por: Li, Yuan, et al.
Publicado: (2020)

Finding and extending ancient simple sequence repeat-derived regions in the human genome
por: Shortt, Jonathan A., et al.
Publicado: (2020)

Assessment of simple sequence repeats signature in hepatitis E virus (HEV) genomes
por: Jilani, Md Gulam, et al.
Publicado: (2022)

Genome wide characterization of simple sequence repeats in watermelon genome and their application in comparative mapping and genetic diversity analysis
por: Zhu, Huayu, et al.
Publicado: (2016)

Phylogenetic significance of the characteristics of simple sequence repeats at the genus level based on the complete chloroplast genome sequences of Cyatheaceae
por: Zhu, Ming, et al.
Publicado: (2021)

Cannot write session to /tmp/vufind_sessions/sess_sqipmclr49dr5anps9h6ad1qii