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Accelerated 2D magnetic resonance spectroscopy of single spins using matrix completion
Two dimensional nuclear magnetic resonance (NMR) spectroscopy is one of the major tools for analysing the chemical structure of organic molecules and proteins. Despite its power, this technique requires long measurement times, which, particularly in the recently emerging diamond based single molecul...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4668552/ https://www.ncbi.nlm.nih.gov/pubmed/26631593 http://dx.doi.org/10.1038/srep17728 |
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author | Scheuer, Jochen Stark, Alexander Kost, Matthias Plenio, Martin B. Naydenov, Boris Jelezko, Fedor |
author_facet | Scheuer, Jochen Stark, Alexander Kost, Matthias Plenio, Martin B. Naydenov, Boris Jelezko, Fedor |
author_sort | Scheuer, Jochen |
collection | PubMed |
description | Two dimensional nuclear magnetic resonance (NMR) spectroscopy is one of the major tools for analysing the chemical structure of organic molecules and proteins. Despite its power, this technique requires long measurement times, which, particularly in the recently emerging diamond based single molecule NMR, limits its application to stable samples. Here we demonstrate a method which allows to obtain the spectrum by collecting only a small fraction of the experimental data. Our method is based on matrix completion which can recover the full spectral information from randomly sampled data points. We confirm experimentally the applicability of this technique by performing two dimensional electron spin echo envelope modulation (ESEEM) experiments on a two spin system consisting of a single nitrogen vacancy (NV) centre in diamond coupled to a single (13)C nuclear spin. The signal to noise ratio of the recovered 2D spectrum is compared to the Fourier transform of randomly subsampled data, where we observe a strong suppression of the noise when the matrix completion algorithm is applied. We show that the peaks in the spectrum can be obtained with only 10% of the total number of the data points. We believe that our results reported here can find an application in all types of two dimensional spectroscopy, as long as the measured matrices have a low rank. |
format | Online Article Text |
id | pubmed-4668552 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-46685522015-12-09 Accelerated 2D magnetic resonance spectroscopy of single spins using matrix completion Scheuer, Jochen Stark, Alexander Kost, Matthias Plenio, Martin B. Naydenov, Boris Jelezko, Fedor Sci Rep Article Two dimensional nuclear magnetic resonance (NMR) spectroscopy is one of the major tools for analysing the chemical structure of organic molecules and proteins. Despite its power, this technique requires long measurement times, which, particularly in the recently emerging diamond based single molecule NMR, limits its application to stable samples. Here we demonstrate a method which allows to obtain the spectrum by collecting only a small fraction of the experimental data. Our method is based on matrix completion which can recover the full spectral information from randomly sampled data points. We confirm experimentally the applicability of this technique by performing two dimensional electron spin echo envelope modulation (ESEEM) experiments on a two spin system consisting of a single nitrogen vacancy (NV) centre in diamond coupled to a single (13)C nuclear spin. The signal to noise ratio of the recovered 2D spectrum is compared to the Fourier transform of randomly subsampled data, where we observe a strong suppression of the noise when the matrix completion algorithm is applied. We show that the peaks in the spectrum can be obtained with only 10% of the total number of the data points. We believe that our results reported here can find an application in all types of two dimensional spectroscopy, as long as the measured matrices have a low rank. Nature Publishing Group 2015-12-03 /pmc/articles/PMC4668552/ /pubmed/26631593 http://dx.doi.org/10.1038/srep17728 Text en Copyright © 2015, Macmillan Publishers Limited http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Scheuer, Jochen Stark, Alexander Kost, Matthias Plenio, Martin B. Naydenov, Boris Jelezko, Fedor Accelerated 2D magnetic resonance spectroscopy of single spins using matrix completion |
title | Accelerated 2D magnetic resonance spectroscopy of single spins using matrix completion |
title_full | Accelerated 2D magnetic resonance spectroscopy of single spins using matrix completion |
title_fullStr | Accelerated 2D magnetic resonance spectroscopy of single spins using matrix completion |
title_full_unstemmed | Accelerated 2D magnetic resonance spectroscopy of single spins using matrix completion |
title_short | Accelerated 2D magnetic resonance spectroscopy of single spins using matrix completion |
title_sort | accelerated 2d magnetic resonance spectroscopy of single spins using matrix completion |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4668552/ https://www.ncbi.nlm.nih.gov/pubmed/26631593 http://dx.doi.org/10.1038/srep17728 |
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