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Congruence between cytochrome oxidase I (COI) and morphological data in Anuraphis spp. (Hemiptera, Aphididae) with a comparison between the utility of the 5’ barcode and 3’ COI regions
Abstract. The discrimination of species in the genus Anuraphis is particularly difficult due to the overlap of morphological characters. In this study, we used the 5’ (barcode) and 3’ regions of (COI) to test their utility in the identification of species in this genus as well as closely related spe...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Pensoft Publishers
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4668903/ https://www.ncbi.nlm.nih.gov/pubmed/26692796 http://dx.doi.org/10.3897/zookeys.529.6081 |
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author | Cocuzza, Giuseppe E. Massimino Silvestro, Silvia Di Giordano, Rosanna Rapisarda, Carmelo |
author_facet | Cocuzza, Giuseppe E. Massimino Silvestro, Silvia Di Giordano, Rosanna Rapisarda, Carmelo |
author_sort | Cocuzza, Giuseppe E. Massimino |
collection | PubMed |
description | Abstract. The discrimination of species in the genus Anuraphis is particularly difficult due to the overlap of morphological characters. In this study, we used the 5’ (barcode) and 3’ regions of (COI) to test their utility in the identification of species in this genus as well as closely related species. Both regions were useful to discriminate all the species tested. However the non-barcode 3’ region resulted in higher resolution and support for species relationships when the data were analyzed using both Maximum Likelihood and MrBayes. We propose the development of an integrated database that encompasses morphological, molecular, life-cycle, host plant and bibliographic information to facilitate and increase the accuracy of aphid identification. |
format | Online Article Text |
id | pubmed-4668903 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Pensoft Publishers |
record_format | MEDLINE/PubMed |
spelling | pubmed-46689032015-12-11 Congruence between cytochrome oxidase I (COI) and morphological data in Anuraphis spp. (Hemiptera, Aphididae) with a comparison between the utility of the 5’ barcode and 3’ COI regions Cocuzza, Giuseppe E. Massimino Silvestro, Silvia Di Giordano, Rosanna Rapisarda, Carmelo Zookeys Research Article Abstract. The discrimination of species in the genus Anuraphis is particularly difficult due to the overlap of morphological characters. In this study, we used the 5’ (barcode) and 3’ regions of (COI) to test their utility in the identification of species in this genus as well as closely related species. Both regions were useful to discriminate all the species tested. However the non-barcode 3’ region resulted in higher resolution and support for species relationships when the data were analyzed using both Maximum Likelihood and MrBayes. We propose the development of an integrated database that encompasses morphological, molecular, life-cycle, host plant and bibliographic information to facilitate and increase the accuracy of aphid identification. Pensoft Publishers 2015-10-26 /pmc/articles/PMC4668903/ /pubmed/26692796 http://dx.doi.org/10.3897/zookeys.529.6081 Text en Giuseppe E. Massimino Cocuzza, Silvia Di Silvestro, Rosanna Giordano, Carmelo Rapisarda http://creativecommons.org/licenses/by/4.0 This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Cocuzza, Giuseppe E. Massimino Silvestro, Silvia Di Giordano, Rosanna Rapisarda, Carmelo Congruence between cytochrome oxidase I (COI) and morphological data in Anuraphis spp. (Hemiptera, Aphididae) with a comparison between the utility of the 5’ barcode and 3’ COI regions |
title | Congruence between cytochrome oxidase I (COI) and morphological data in Anuraphis spp. (Hemiptera, Aphididae) with a comparison between the utility of the 5’ barcode and 3’ COI regions |
title_full | Congruence between cytochrome oxidase I (COI) and morphological data in Anuraphis spp. (Hemiptera, Aphididae) with a comparison between the utility of the 5’ barcode and 3’ COI regions |
title_fullStr | Congruence between cytochrome oxidase I (COI) and morphological data in Anuraphis spp. (Hemiptera, Aphididae) with a comparison between the utility of the 5’ barcode and 3’ COI regions |
title_full_unstemmed | Congruence between cytochrome oxidase I (COI) and morphological data in Anuraphis spp. (Hemiptera, Aphididae) with a comparison between the utility of the 5’ barcode and 3’ COI regions |
title_short | Congruence between cytochrome oxidase I (COI) and morphological data in Anuraphis spp. (Hemiptera, Aphididae) with a comparison between the utility of the 5’ barcode and 3’ COI regions |
title_sort | congruence between cytochrome oxidase i (coi) and morphological data in anuraphis spp. (hemiptera, aphididae) with a comparison between the utility of the 5’ barcode and 3’ coi regions |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4668903/ https://www.ncbi.nlm.nih.gov/pubmed/26692796 http://dx.doi.org/10.3897/zookeys.529.6081 |
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