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Congruence between cytochrome oxidase I (COI) and morphological data in Anuraphis spp. (Hemiptera, Aphididae) with a comparison between the utility of the 5’ barcode and 3’ COI regions

Abstract. The discrimination of species in the genus Anuraphis is particularly difficult due to the overlap of morphological characters. In this study, we used the 5’ (barcode) and 3’ regions of (COI) to test their utility in the identification of species in this genus as well as closely related spe...

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Autores principales: Cocuzza, Giuseppe E. Massimino, Silvestro, Silvia Di, Giordano, Rosanna, Rapisarda, Carmelo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Pensoft Publishers 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4668903/
https://www.ncbi.nlm.nih.gov/pubmed/26692796
http://dx.doi.org/10.3897/zookeys.529.6081
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author Cocuzza, Giuseppe E. Massimino
Silvestro, Silvia Di
Giordano, Rosanna
Rapisarda, Carmelo
author_facet Cocuzza, Giuseppe E. Massimino
Silvestro, Silvia Di
Giordano, Rosanna
Rapisarda, Carmelo
author_sort Cocuzza, Giuseppe E. Massimino
collection PubMed
description Abstract. The discrimination of species in the genus Anuraphis is particularly difficult due to the overlap of morphological characters. In this study, we used the 5’ (barcode) and 3’ regions of (COI) to test their utility in the identification of species in this genus as well as closely related species. Both regions were useful to discriminate all the species tested. However the non-barcode 3’ region resulted in higher resolution and support for species relationships when the data were analyzed using both Maximum Likelihood and MrBayes. We propose the development of an integrated database that encompasses morphological, molecular, life-cycle, host plant and bibliographic information to facilitate and increase the accuracy of aphid identification.
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spelling pubmed-46689032015-12-11 Congruence between cytochrome oxidase I (COI) and morphological data in Anuraphis spp. (Hemiptera, Aphididae) with a comparison between the utility of the 5’ barcode and 3’ COI regions Cocuzza, Giuseppe E. Massimino Silvestro, Silvia Di Giordano, Rosanna Rapisarda, Carmelo Zookeys Research Article Abstract. The discrimination of species in the genus Anuraphis is particularly difficult due to the overlap of morphological characters. In this study, we used the 5’ (barcode) and 3’ regions of (COI) to test their utility in the identification of species in this genus as well as closely related species. Both regions were useful to discriminate all the species tested. However the non-barcode 3’ region resulted in higher resolution and support for species relationships when the data were analyzed using both Maximum Likelihood and MrBayes. We propose the development of an integrated database that encompasses morphological, molecular, life-cycle, host plant and bibliographic information to facilitate and increase the accuracy of aphid identification. Pensoft Publishers 2015-10-26 /pmc/articles/PMC4668903/ /pubmed/26692796 http://dx.doi.org/10.3897/zookeys.529.6081 Text en Giuseppe E. Massimino Cocuzza, Silvia Di Silvestro, Rosanna Giordano, Carmelo Rapisarda http://creativecommons.org/licenses/by/4.0 This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Cocuzza, Giuseppe E. Massimino
Silvestro, Silvia Di
Giordano, Rosanna
Rapisarda, Carmelo
Congruence between cytochrome oxidase I (COI) and morphological data in Anuraphis spp. (Hemiptera, Aphididae) with a comparison between the utility of the 5’ barcode and 3’ COI regions
title Congruence between cytochrome oxidase I (COI) and morphological data in Anuraphis spp. (Hemiptera, Aphididae) with a comparison between the utility of the 5’ barcode and 3’ COI regions
title_full Congruence between cytochrome oxidase I (COI) and morphological data in Anuraphis spp. (Hemiptera, Aphididae) with a comparison between the utility of the 5’ barcode and 3’ COI regions
title_fullStr Congruence between cytochrome oxidase I (COI) and morphological data in Anuraphis spp. (Hemiptera, Aphididae) with a comparison between the utility of the 5’ barcode and 3’ COI regions
title_full_unstemmed Congruence between cytochrome oxidase I (COI) and morphological data in Anuraphis spp. (Hemiptera, Aphididae) with a comparison between the utility of the 5’ barcode and 3’ COI regions
title_short Congruence between cytochrome oxidase I (COI) and morphological data in Anuraphis spp. (Hemiptera, Aphididae) with a comparison between the utility of the 5’ barcode and 3’ COI regions
title_sort congruence between cytochrome oxidase i (coi) and morphological data in anuraphis spp. (hemiptera, aphididae) with a comparison between the utility of the 5’ barcode and 3’ coi regions
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4668903/
https://www.ncbi.nlm.nih.gov/pubmed/26692796
http://dx.doi.org/10.3897/zookeys.529.6081
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