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A synthetic growth switch based on controlled expression of RNA polymerase
The ability to control growth is essential for fundamental studies of bacterial physiology and biotechnological applications. We have engineered an Escherichia coli strain in which the transcription of a key component of the gene expression machinery, RNA polymerase, is under the control of an induc...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4670729/ https://www.ncbi.nlm.nih.gov/pubmed/26596932 http://dx.doi.org/10.15252/msb.20156382 |
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author | Izard, Jérôme Gomez Balderas, Cindy DC Ropers, Delphine Lacour, Stephan Song, Xiaohu Yang, Yifan Lindner, Ariel B Geiselmann, Johannes de Jong, Hidde |
author_facet | Izard, Jérôme Gomez Balderas, Cindy DC Ropers, Delphine Lacour, Stephan Song, Xiaohu Yang, Yifan Lindner, Ariel B Geiselmann, Johannes de Jong, Hidde |
author_sort | Izard, Jérôme |
collection | PubMed |
description | The ability to control growth is essential for fundamental studies of bacterial physiology and biotechnological applications. We have engineered an Escherichia coli strain in which the transcription of a key component of the gene expression machinery, RNA polymerase, is under the control of an inducible promoter. By changing the inducer concentration in the medium, we can adjust the RNA polymerase concentration and thereby switch bacterial growth between zero and the maximal growth rate supported by the medium. We show that our synthetic growth switch functions in a medium‐independent and reversible way, and we provide evidence that the switching phenotype arises from the ultrasensitive response of the growth rate to the concentration of RNA polymerase. We present an application of the growth switch in which both the wild‐type E. coli strain and our modified strain are endowed with the capacity to produce glycerol when growing on glucose. Cells in which growth has been switched off continue to be metabolically active and harness the energy gain to produce glycerol at a twofold higher yield than in cells with natural control of RNA polymerase expression. Remarkably, without any further optimization, the improved yield is close to the theoretical maximum computed from a flux balance model of E. coli metabolism. The proposed synthetic growth switch is a promising tool for gaining a better understanding of bacterial physiology and for applications in synthetic biology and biotechnology. |
format | Online Article Text |
id | pubmed-4670729 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-46707292015-12-15 A synthetic growth switch based on controlled expression of RNA polymerase Izard, Jérôme Gomez Balderas, Cindy DC Ropers, Delphine Lacour, Stephan Song, Xiaohu Yang, Yifan Lindner, Ariel B Geiselmann, Johannes de Jong, Hidde Mol Syst Biol Articles The ability to control growth is essential for fundamental studies of bacterial physiology and biotechnological applications. We have engineered an Escherichia coli strain in which the transcription of a key component of the gene expression machinery, RNA polymerase, is under the control of an inducible promoter. By changing the inducer concentration in the medium, we can adjust the RNA polymerase concentration and thereby switch bacterial growth between zero and the maximal growth rate supported by the medium. We show that our synthetic growth switch functions in a medium‐independent and reversible way, and we provide evidence that the switching phenotype arises from the ultrasensitive response of the growth rate to the concentration of RNA polymerase. We present an application of the growth switch in which both the wild‐type E. coli strain and our modified strain are endowed with the capacity to produce glycerol when growing on glucose. Cells in which growth has been switched off continue to be metabolically active and harness the energy gain to produce glycerol at a twofold higher yield than in cells with natural control of RNA polymerase expression. Remarkably, without any further optimization, the improved yield is close to the theoretical maximum computed from a flux balance model of E. coli metabolism. The proposed synthetic growth switch is a promising tool for gaining a better understanding of bacterial physiology and for applications in synthetic biology and biotechnology. John Wiley and Sons Inc. 2015-11-23 /pmc/articles/PMC4670729/ /pubmed/26596932 http://dx.doi.org/10.15252/msb.20156382 Text en © 2015 The Authors. Published under the terms of the CC BY 4.0 license This is an open access article under the terms of the Creative Commons Attribution 4.0 (http://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Articles Izard, Jérôme Gomez Balderas, Cindy DC Ropers, Delphine Lacour, Stephan Song, Xiaohu Yang, Yifan Lindner, Ariel B Geiselmann, Johannes de Jong, Hidde A synthetic growth switch based on controlled expression of RNA polymerase |
title | A synthetic growth switch based on controlled expression of RNA polymerase |
title_full | A synthetic growth switch based on controlled expression of RNA polymerase |
title_fullStr | A synthetic growth switch based on controlled expression of RNA polymerase |
title_full_unstemmed | A synthetic growth switch based on controlled expression of RNA polymerase |
title_short | A synthetic growth switch based on controlled expression of RNA polymerase |
title_sort | synthetic growth switch based on controlled expression of rna polymerase |
topic | Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4670729/ https://www.ncbi.nlm.nih.gov/pubmed/26596932 http://dx.doi.org/10.15252/msb.20156382 |
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