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Improving performance of the Tariff Method for assigning causes of death to verbal autopsies
BACKGROUND: Reliable data on the distribution of causes of death (COD) in a population are fundamental to good public health practice. In the absence of comprehensive medical certification of deaths, the only feasible way to collect essential mortality data is verbal autopsy (VA). The Tariff Method...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4672473/ https://www.ncbi.nlm.nih.gov/pubmed/26644140 http://dx.doi.org/10.1186/s12916-015-0527-9 |
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author | Serina, Peter Riley, Ian Stewart, Andrea James, Spencer L. Flaxman, Abraham D. Lozano, Rafael Hernandez, Bernardo Mooney, Meghan D. Luning, Richard Black, Robert Ahuja, Ramesh Alam, Nurul Alam, Sayed Saidul Ali, Said Mohammed Atkinson, Charles Baqui, Abdulla H. Chowdhury, Hafizur R. Dandona, Lalit Dandona, Rakhi Dantzer, Emily Darmstadt, Gary L. Das, Vinita Dhingra, Usha Dutta, Arup Fawzi, Wafaie Freeman, Michael Gomez, Sara Gouda, Hebe N. Joshi, Rohina Kalter, Henry D. Kumar, Aarti Kumar, Vishwajeet Lucero, Marilla Maraga, Seri Mehta, Saurabh Neal, Bruce Ohno, Summer Lockett Phillips, David Pierce, Kelsey Prasad, Rajendra Praveen, Devarsatee Premji, Zul Ramirez-Villalobos, Dolores Rarau, Patricia Remolador, Hazel Romero, Minerva Said, Mwanaidi Sanvictores, Diozele Sazawal, Sunil Streatfield, Peter K. Tallo, Veronica Vadhatpour, Alireza Vano, Miriam Murray, Christopher J. L. Lopez, Alan D. |
author_facet | Serina, Peter Riley, Ian Stewart, Andrea James, Spencer L. Flaxman, Abraham D. Lozano, Rafael Hernandez, Bernardo Mooney, Meghan D. Luning, Richard Black, Robert Ahuja, Ramesh Alam, Nurul Alam, Sayed Saidul Ali, Said Mohammed Atkinson, Charles Baqui, Abdulla H. Chowdhury, Hafizur R. Dandona, Lalit Dandona, Rakhi Dantzer, Emily Darmstadt, Gary L. Das, Vinita Dhingra, Usha Dutta, Arup Fawzi, Wafaie Freeman, Michael Gomez, Sara Gouda, Hebe N. Joshi, Rohina Kalter, Henry D. Kumar, Aarti Kumar, Vishwajeet Lucero, Marilla Maraga, Seri Mehta, Saurabh Neal, Bruce Ohno, Summer Lockett Phillips, David Pierce, Kelsey Prasad, Rajendra Praveen, Devarsatee Premji, Zul Ramirez-Villalobos, Dolores Rarau, Patricia Remolador, Hazel Romero, Minerva Said, Mwanaidi Sanvictores, Diozele Sazawal, Sunil Streatfield, Peter K. Tallo, Veronica Vadhatpour, Alireza Vano, Miriam Murray, Christopher J. L. Lopez, Alan D. |
author_sort | Serina, Peter |
collection | PubMed |
description | BACKGROUND: Reliable data on the distribution of causes of death (COD) in a population are fundamental to good public health practice. In the absence of comprehensive medical certification of deaths, the only feasible way to collect essential mortality data is verbal autopsy (VA). The Tariff Method was developed by the Population Health Metrics Research Consortium (PHMRC) to ascertain COD from VA information. Given its potential for improving information about COD, there is interest in refining the method. We describe the further development of the Tariff Method. METHODS: This study uses data from the PHMRC and the National Health and Medical Research Council (NHMRC) of Australia studies. Gold standard clinical diagnostic criteria for hospital deaths were specified for a target cause list. VAs were collected from families using the PHMRC verbal autopsy instrument including health care experience (HCE). The original Tariff Method (Tariff 1.0) was trained using the validated PHMRC database for which VAs had been collected for deaths with hospital records fulfilling the gold standard criteria (validated VAs). In this study, the performance of Tariff 1.0 was tested using VAs from household surveys (community VAs) collected for the PHMRC and NHMRC studies. We then corrected the model to account for the previous observed biases of the model, and Tariff 2.0 was developed. The performance of Tariff 2.0 was measured at individual and population levels using the validated PHMRC database. RESULTS: For median chance-corrected concordance (CCC) and mean cause-specific mortality fraction (CSMF) accuracy, and for each of three modules with and without HCE, Tariff 2.0 performs significantly better than the Tariff 1.0, especially in children and neonates. Improvement in CSMF accuracy with HCE was 2.5 %, 7.4 %, and 14.9 % for adults, children, and neonates, respectively, and for median CCC with HCE it was 6.0 %, 13.5 %, and 21.2 %, respectively. Similar levels of improvement are seen in analyses without HCE. CONCLUSIONS: Tariff 2.0 addresses the main shortcomings of the application of the Tariff Method to analyze data from VAs in community settings. It provides an estimation of COD from VAs with better performance at the individual and population level than the previous version of this method, and it is publicly available for use. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12916-015-0527-9) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-4672473 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-46724732015-12-09 Improving performance of the Tariff Method for assigning causes of death to verbal autopsies Serina, Peter Riley, Ian Stewart, Andrea James, Spencer L. Flaxman, Abraham D. Lozano, Rafael Hernandez, Bernardo Mooney, Meghan D. Luning, Richard Black, Robert Ahuja, Ramesh Alam, Nurul Alam, Sayed Saidul Ali, Said Mohammed Atkinson, Charles Baqui, Abdulla H. Chowdhury, Hafizur R. Dandona, Lalit Dandona, Rakhi Dantzer, Emily Darmstadt, Gary L. Das, Vinita Dhingra, Usha Dutta, Arup Fawzi, Wafaie Freeman, Michael Gomez, Sara Gouda, Hebe N. Joshi, Rohina Kalter, Henry D. Kumar, Aarti Kumar, Vishwajeet Lucero, Marilla Maraga, Seri Mehta, Saurabh Neal, Bruce Ohno, Summer Lockett Phillips, David Pierce, Kelsey Prasad, Rajendra Praveen, Devarsatee Premji, Zul Ramirez-Villalobos, Dolores Rarau, Patricia Remolador, Hazel Romero, Minerva Said, Mwanaidi Sanvictores, Diozele Sazawal, Sunil Streatfield, Peter K. Tallo, Veronica Vadhatpour, Alireza Vano, Miriam Murray, Christopher J. L. Lopez, Alan D. BMC Med Research Article BACKGROUND: Reliable data on the distribution of causes of death (COD) in a population are fundamental to good public health practice. In the absence of comprehensive medical certification of deaths, the only feasible way to collect essential mortality data is verbal autopsy (VA). The Tariff Method was developed by the Population Health Metrics Research Consortium (PHMRC) to ascertain COD from VA information. Given its potential for improving information about COD, there is interest in refining the method. We describe the further development of the Tariff Method. METHODS: This study uses data from the PHMRC and the National Health and Medical Research Council (NHMRC) of Australia studies. Gold standard clinical diagnostic criteria for hospital deaths were specified for a target cause list. VAs were collected from families using the PHMRC verbal autopsy instrument including health care experience (HCE). The original Tariff Method (Tariff 1.0) was trained using the validated PHMRC database for which VAs had been collected for deaths with hospital records fulfilling the gold standard criteria (validated VAs). In this study, the performance of Tariff 1.0 was tested using VAs from household surveys (community VAs) collected for the PHMRC and NHMRC studies. We then corrected the model to account for the previous observed biases of the model, and Tariff 2.0 was developed. The performance of Tariff 2.0 was measured at individual and population levels using the validated PHMRC database. RESULTS: For median chance-corrected concordance (CCC) and mean cause-specific mortality fraction (CSMF) accuracy, and for each of three modules with and without HCE, Tariff 2.0 performs significantly better than the Tariff 1.0, especially in children and neonates. Improvement in CSMF accuracy with HCE was 2.5 %, 7.4 %, and 14.9 % for adults, children, and neonates, respectively, and for median CCC with HCE it was 6.0 %, 13.5 %, and 21.2 %, respectively. Similar levels of improvement are seen in analyses without HCE. CONCLUSIONS: Tariff 2.0 addresses the main shortcomings of the application of the Tariff Method to analyze data from VAs in community settings. It provides an estimation of COD from VAs with better performance at the individual and population level than the previous version of this method, and it is publicly available for use. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12916-015-0527-9) contains supplementary material, which is available to authorized users. BioMed Central 2015-12-08 /pmc/articles/PMC4672473/ /pubmed/26644140 http://dx.doi.org/10.1186/s12916-015-0527-9 Text en © Serina et al. 2015 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Article Serina, Peter Riley, Ian Stewart, Andrea James, Spencer L. Flaxman, Abraham D. Lozano, Rafael Hernandez, Bernardo Mooney, Meghan D. Luning, Richard Black, Robert Ahuja, Ramesh Alam, Nurul Alam, Sayed Saidul Ali, Said Mohammed Atkinson, Charles Baqui, Abdulla H. Chowdhury, Hafizur R. Dandona, Lalit Dandona, Rakhi Dantzer, Emily Darmstadt, Gary L. Das, Vinita Dhingra, Usha Dutta, Arup Fawzi, Wafaie Freeman, Michael Gomez, Sara Gouda, Hebe N. Joshi, Rohina Kalter, Henry D. Kumar, Aarti Kumar, Vishwajeet Lucero, Marilla Maraga, Seri Mehta, Saurabh Neal, Bruce Ohno, Summer Lockett Phillips, David Pierce, Kelsey Prasad, Rajendra Praveen, Devarsatee Premji, Zul Ramirez-Villalobos, Dolores Rarau, Patricia Remolador, Hazel Romero, Minerva Said, Mwanaidi Sanvictores, Diozele Sazawal, Sunil Streatfield, Peter K. Tallo, Veronica Vadhatpour, Alireza Vano, Miriam Murray, Christopher J. L. Lopez, Alan D. Improving performance of the Tariff Method for assigning causes of death to verbal autopsies |
title | Improving performance of the Tariff Method for assigning causes of death to verbal autopsies |
title_full | Improving performance of the Tariff Method for assigning causes of death to verbal autopsies |
title_fullStr | Improving performance of the Tariff Method for assigning causes of death to verbal autopsies |
title_full_unstemmed | Improving performance of the Tariff Method for assigning causes of death to verbal autopsies |
title_short | Improving performance of the Tariff Method for assigning causes of death to verbal autopsies |
title_sort | improving performance of the tariff method for assigning causes of death to verbal autopsies |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4672473/ https://www.ncbi.nlm.nih.gov/pubmed/26644140 http://dx.doi.org/10.1186/s12916-015-0527-9 |
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