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Recent Advances in Biosynthetic Modeling of Nitric Oxide Reductases and Insights Gained from Nuclear Resonance Vibrational and Other Spectroscopic Studies

[Image: see text] This Forum Article focuses on recent advances in structural and spectroscopic studies of biosynthetic models of nitric oxide reductases (NORs). NORs are complex metalloenzymes found in the denitrification pathway of Earth’s nitrogen cycle where they catalyze the proton-dependent tw...

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Autores principales: Chakraborty, Saumen, Reed, Julian, Sage, J. Timothy, Branagan, Nicole C., Petrik, Igor D., Miner, Kyle D., Hu, Michael Y., Zhao, Jiyong, Alp, E. Ercan, Lu, Yi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2015
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4677664/
https://www.ncbi.nlm.nih.gov/pubmed/26274098
http://dx.doi.org/10.1021/acs.inorgchem.5b01105
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author Chakraborty, Saumen
Reed, Julian
Sage, J. Timothy
Branagan, Nicole C.
Petrik, Igor D.
Miner, Kyle D.
Hu, Michael Y.
Zhao, Jiyong
Alp, E. Ercan
Lu, Yi
author_facet Chakraborty, Saumen
Reed, Julian
Sage, J. Timothy
Branagan, Nicole C.
Petrik, Igor D.
Miner, Kyle D.
Hu, Michael Y.
Zhao, Jiyong
Alp, E. Ercan
Lu, Yi
author_sort Chakraborty, Saumen
collection PubMed
description [Image: see text] This Forum Article focuses on recent advances in structural and spectroscopic studies of biosynthetic models of nitric oxide reductases (NORs). NORs are complex metalloenzymes found in the denitrification pathway of Earth’s nitrogen cycle where they catalyze the proton-dependent two-electron reduction of nitric oxide (NO) to nitrous oxide (N(2)O). While much progress has been made in biochemical and biophysical studies of native NORs and their variants, a clear mechanistic understanding of this important metalloenzyme related to its function is still elusive. We report herein UV–vis and nuclear resonance vibrational spectroscopy (NRVS) studies of mononitrosylated intermediates of the NOR reaction of a biosynthetic model. The ability to selectively substitute metals at either heme or nonheme metal sites allows the introduction of independent (57)Fe probe atoms at either site, as well as allowing the preparation of analogues of stable reaction intermediates by replacing either metal with a redox inactive metal. Together with previous structural and spectroscopic results, we summarize insights gained from studying these biosynthetic models toward understanding structural features responsible for the NOR activity and its mechanism. The outlook on NOR modeling is also discussed, with an emphasis on the design of models capable of catalytic turnovers designed based on close mimics of the secondary coordination sphere of native NORs.
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spelling pubmed-46776642016-08-14 Recent Advances in Biosynthetic Modeling of Nitric Oxide Reductases and Insights Gained from Nuclear Resonance Vibrational and Other Spectroscopic Studies Chakraborty, Saumen Reed, Julian Sage, J. Timothy Branagan, Nicole C. Petrik, Igor D. Miner, Kyle D. Hu, Michael Y. Zhao, Jiyong Alp, E. Ercan Lu, Yi Inorg Chem [Image: see text] This Forum Article focuses on recent advances in structural and spectroscopic studies of biosynthetic models of nitric oxide reductases (NORs). NORs are complex metalloenzymes found in the denitrification pathway of Earth’s nitrogen cycle where they catalyze the proton-dependent two-electron reduction of nitric oxide (NO) to nitrous oxide (N(2)O). While much progress has been made in biochemical and biophysical studies of native NORs and their variants, a clear mechanistic understanding of this important metalloenzyme related to its function is still elusive. We report herein UV–vis and nuclear resonance vibrational spectroscopy (NRVS) studies of mononitrosylated intermediates of the NOR reaction of a biosynthetic model. The ability to selectively substitute metals at either heme or nonheme metal sites allows the introduction of independent (57)Fe probe atoms at either site, as well as allowing the preparation of analogues of stable reaction intermediates by replacing either metal with a redox inactive metal. Together with previous structural and spectroscopic results, we summarize insights gained from studying these biosynthetic models toward understanding structural features responsible for the NOR activity and its mechanism. The outlook on NOR modeling is also discussed, with an emphasis on the design of models capable of catalytic turnovers designed based on close mimics of the secondary coordination sphere of native NORs. American Chemical Society 2015-08-14 2015-10-05 /pmc/articles/PMC4677664/ /pubmed/26274098 http://dx.doi.org/10.1021/acs.inorgchem.5b01105 Text en Copyright © 2015 American Chemical Society This is an open access article published under an ACS AuthorChoice License (http://pubs.acs.org/page/policy/authorchoice_termsofuse.html) , which permits copying and redistribution of the article or any adaptations for non-commercial purposes.
spellingShingle Chakraborty, Saumen
Reed, Julian
Sage, J. Timothy
Branagan, Nicole C.
Petrik, Igor D.
Miner, Kyle D.
Hu, Michael Y.
Zhao, Jiyong
Alp, E. Ercan
Lu, Yi
Recent Advances in Biosynthetic Modeling of Nitric Oxide Reductases and Insights Gained from Nuclear Resonance Vibrational and Other Spectroscopic Studies
title Recent Advances in Biosynthetic Modeling of Nitric Oxide Reductases and Insights Gained from Nuclear Resonance Vibrational and Other Spectroscopic Studies
title_full Recent Advances in Biosynthetic Modeling of Nitric Oxide Reductases and Insights Gained from Nuclear Resonance Vibrational and Other Spectroscopic Studies
title_fullStr Recent Advances in Biosynthetic Modeling of Nitric Oxide Reductases and Insights Gained from Nuclear Resonance Vibrational and Other Spectroscopic Studies
title_full_unstemmed Recent Advances in Biosynthetic Modeling of Nitric Oxide Reductases and Insights Gained from Nuclear Resonance Vibrational and Other Spectroscopic Studies
title_short Recent Advances in Biosynthetic Modeling of Nitric Oxide Reductases and Insights Gained from Nuclear Resonance Vibrational and Other Spectroscopic Studies
title_sort recent advances in biosynthetic modeling of nitric oxide reductases and insights gained from nuclear resonance vibrational and other spectroscopic studies
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4677664/
https://www.ncbi.nlm.nih.gov/pubmed/26274098
http://dx.doi.org/10.1021/acs.inorgchem.5b01105
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