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A Comprehensive Approach to Assess Arabidopsis Survival Phenotype in Water-Limited Condition Using a Non-invasive High-Throughput Phenomics Platform
With the rapid rise in global population and the challenges caused by climate changes, the maximization of plant productivity and the development of sustainable agriculture strategies are vital for food security. One of the resources more affected in this new environment will be the limitation of wa...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4678186/ https://www.ncbi.nlm.nih.gov/pubmed/26697051 http://dx.doi.org/10.3389/fpls.2015.01101 |
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author | Vello, Emilio Tomita, Akiko Diallo, Amadou Oury Bureau, Thomas E. |
author_facet | Vello, Emilio Tomita, Akiko Diallo, Amadou Oury Bureau, Thomas E. |
author_sort | Vello, Emilio |
collection | PubMed |
description | With the rapid rise in global population and the challenges caused by climate changes, the maximization of plant productivity and the development of sustainable agriculture strategies are vital for food security. One of the resources more affected in this new environment will be the limitation of water. In this study, we describe the use of non-invasive technologies exploiting sensors for visible, fluorescent, and near-infrared lights to accurately screen survival phenotypes in Arabidopsis thaliana exposed to water-limited conditions. We implemented two drought protocols and a robust analysis methodology that enabled us to clearly assess the wilting or dryness status of the plants at different time points using a phenomics platform. In conclusion, our approach has shown to be very accurate and suitable for experiments where hundred of samples have to be screened making a manual evaluation unthinkable. This approach can be used not only in functional genomics studies but also in agricultural applications. |
format | Online Article Text |
id | pubmed-4678186 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-46781862015-12-22 A Comprehensive Approach to Assess Arabidopsis Survival Phenotype in Water-Limited Condition Using a Non-invasive High-Throughput Phenomics Platform Vello, Emilio Tomita, Akiko Diallo, Amadou Oury Bureau, Thomas E. Front Plant Sci Plant Science With the rapid rise in global population and the challenges caused by climate changes, the maximization of plant productivity and the development of sustainable agriculture strategies are vital for food security. One of the resources more affected in this new environment will be the limitation of water. In this study, we describe the use of non-invasive technologies exploiting sensors for visible, fluorescent, and near-infrared lights to accurately screen survival phenotypes in Arabidopsis thaliana exposed to water-limited conditions. We implemented two drought protocols and a robust analysis methodology that enabled us to clearly assess the wilting or dryness status of the plants at different time points using a phenomics platform. In conclusion, our approach has shown to be very accurate and suitable for experiments where hundred of samples have to be screened making a manual evaluation unthinkable. This approach can be used not only in functional genomics studies but also in agricultural applications. Frontiers Media S.A. 2015-12-15 /pmc/articles/PMC4678186/ /pubmed/26697051 http://dx.doi.org/10.3389/fpls.2015.01101 Text en Copyright © 2015 Vello, Tomita, Diallo and Bureau. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Plant Science Vello, Emilio Tomita, Akiko Diallo, Amadou Oury Bureau, Thomas E. A Comprehensive Approach to Assess Arabidopsis Survival Phenotype in Water-Limited Condition Using a Non-invasive High-Throughput Phenomics Platform |
title | A Comprehensive Approach to Assess Arabidopsis Survival Phenotype in Water-Limited Condition Using a Non-invasive High-Throughput Phenomics Platform |
title_full | A Comprehensive Approach to Assess Arabidopsis Survival Phenotype in Water-Limited Condition Using a Non-invasive High-Throughput Phenomics Platform |
title_fullStr | A Comprehensive Approach to Assess Arabidopsis Survival Phenotype in Water-Limited Condition Using a Non-invasive High-Throughput Phenomics Platform |
title_full_unstemmed | A Comprehensive Approach to Assess Arabidopsis Survival Phenotype in Water-Limited Condition Using a Non-invasive High-Throughput Phenomics Platform |
title_short | A Comprehensive Approach to Assess Arabidopsis Survival Phenotype in Water-Limited Condition Using a Non-invasive High-Throughput Phenomics Platform |
title_sort | comprehensive approach to assess arabidopsis survival phenotype in water-limited condition using a non-invasive high-throughput phenomics platform |
topic | Plant Science |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4678186/ https://www.ncbi.nlm.nih.gov/pubmed/26697051 http://dx.doi.org/10.3389/fpls.2015.01101 |
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