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First Insights into the Viral Communities of the Deep-sea Anoxic Brines of the Red Sea

The deep-sea brines of the Red Sea include some of the most extreme and unique environments on Earth. They combine high salinities with increases in temperature, heavy metals, hydrostatic pressure, and anoxic conditions, creating unique settings for thriving populations of novel extremophiles. Despi...

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Detalles Bibliográficos
Autores principales: Antunes, André, Alam, Intikhab, Simões, Marta Filipa, Daniels, Camille, Ferreira, Ari J.S., Siam, Rania, El-Dorry, Hamza, Bajic, Vladimir B.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4678784/
https://www.ncbi.nlm.nih.gov/pubmed/26529193
http://dx.doi.org/10.1016/j.gpb.2015.06.004
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author Antunes, André
Alam, Intikhab
Simões, Marta Filipa
Daniels, Camille
Ferreira, Ari J.S.
Siam, Rania
El-Dorry, Hamza
Bajic, Vladimir B.
author_facet Antunes, André
Alam, Intikhab
Simões, Marta Filipa
Daniels, Camille
Ferreira, Ari J.S.
Siam, Rania
El-Dorry, Hamza
Bajic, Vladimir B.
author_sort Antunes, André
collection PubMed
description The deep-sea brines of the Red Sea include some of the most extreme and unique environments on Earth. They combine high salinities with increases in temperature, heavy metals, hydrostatic pressure, and anoxic conditions, creating unique settings for thriving populations of novel extremophiles. Despite a recent increase of studies focusing on these unusual biotopes, their viral communities remain unexplored. The current survey explores four metagenomic datasets obtained from different brine–seawater interface samples, focusing specifically on the diversity of their viral communities. Data analysis confirmed that the particle-attached viral communities present in the brine–seawater interfaces were diverse and generally dominated by Caudovirales, yet appearing distinct from sample to sample. With a level of caution, we report the unexpected finding of Phycodnaviridae, which infects algae and plants, and trace amounts of insect-infecting Iridoviridae. Results from Kebrit Deep revealed stratification in the viral communities present in the interface: the upper-interface was enriched with viruses associated with typical marine bacteria, while the lower-interface was enriched with haloviruses and halophages. These results provide first insights into the unexplored viral communities present in deep-sea brines of the Red Sea, representing one of the first steps for ongoing and future sampling efforts and studies.
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spelling pubmed-46787842016-01-06 First Insights into the Viral Communities of the Deep-sea Anoxic Brines of the Red Sea Antunes, André Alam, Intikhab Simões, Marta Filipa Daniels, Camille Ferreira, Ari J.S. Siam, Rania El-Dorry, Hamza Bajic, Vladimir B. Genomics Proteomics Bioinformatics Original Research The deep-sea brines of the Red Sea include some of the most extreme and unique environments on Earth. They combine high salinities with increases in temperature, heavy metals, hydrostatic pressure, and anoxic conditions, creating unique settings for thriving populations of novel extremophiles. Despite a recent increase of studies focusing on these unusual biotopes, their viral communities remain unexplored. The current survey explores four metagenomic datasets obtained from different brine–seawater interface samples, focusing specifically on the diversity of their viral communities. Data analysis confirmed that the particle-attached viral communities present in the brine–seawater interfaces were diverse and generally dominated by Caudovirales, yet appearing distinct from sample to sample. With a level of caution, we report the unexpected finding of Phycodnaviridae, which infects algae and plants, and trace amounts of insect-infecting Iridoviridae. Results from Kebrit Deep revealed stratification in the viral communities present in the interface: the upper-interface was enriched with viruses associated with typical marine bacteria, while the lower-interface was enriched with haloviruses and halophages. These results provide first insights into the unexplored viral communities present in deep-sea brines of the Red Sea, representing one of the first steps for ongoing and future sampling efforts and studies. Elsevier 2015-10 2015-10-31 /pmc/articles/PMC4678784/ /pubmed/26529193 http://dx.doi.org/10.1016/j.gpb.2015.06.004 Text en © 2015 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Original Research
Antunes, André
Alam, Intikhab
Simões, Marta Filipa
Daniels, Camille
Ferreira, Ari J.S.
Siam, Rania
El-Dorry, Hamza
Bajic, Vladimir B.
First Insights into the Viral Communities of the Deep-sea Anoxic Brines of the Red Sea
title First Insights into the Viral Communities of the Deep-sea Anoxic Brines of the Red Sea
title_full First Insights into the Viral Communities of the Deep-sea Anoxic Brines of the Red Sea
title_fullStr First Insights into the Viral Communities of the Deep-sea Anoxic Brines of the Red Sea
title_full_unstemmed First Insights into the Viral Communities of the Deep-sea Anoxic Brines of the Red Sea
title_short First Insights into the Viral Communities of the Deep-sea Anoxic Brines of the Red Sea
title_sort first insights into the viral communities of the deep-sea anoxic brines of the red sea
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4678784/
https://www.ncbi.nlm.nih.gov/pubmed/26529193
http://dx.doi.org/10.1016/j.gpb.2015.06.004
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