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Similar Microbial Communities Found on Two Distant Seafloor Basalts

The oceanic crust forms two thirds of the Earth’s surface and hosts a large phylogenetic and functional diversity of microorganisms. While advances have been made in the sedimentary realm, our understanding of the igneous rock portion as a microbial habitat has remained limited. We present the first...

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Autores principales: Singer, Esther, Chong, Lauren S., Heidelberg, John F., Edwards, Katrina J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4679871/
https://www.ncbi.nlm.nih.gov/pubmed/26733957
http://dx.doi.org/10.3389/fmicb.2015.01409
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author Singer, Esther
Chong, Lauren S.
Heidelberg, John F.
Edwards, Katrina J.
author_facet Singer, Esther
Chong, Lauren S.
Heidelberg, John F.
Edwards, Katrina J.
author_sort Singer, Esther
collection PubMed
description The oceanic crust forms two thirds of the Earth’s surface and hosts a large phylogenetic and functional diversity of microorganisms. While advances have been made in the sedimentary realm, our understanding of the igneous rock portion as a microbial habitat has remained limited. We present the first comparative metagenomic microbial community analysis from ocean floor basalt environments at the Lō’ihi Seamount, Hawai’i, and the East Pacific Rise (EPR; 9°N). Phylogenetic analysis indicates the presence of a total of 43 bacterial and archaeal mono-phyletic groups, dominated by Alpha- and Gammaproteobacteria, as well as Thaumarchaeota. Functional gene analysis suggests that these Thaumarchaeota play an important role in ammonium oxidation on seafloor basalts. In addition to ammonium oxidation, the seafloor basalt habitat reveals a wide spectrum of other metabolic potentials, including CO(2) fixation, denitrification, dissimilatory sulfate reduction, and sulfur oxidation. Basalt communities from Lō’ihi and the EPR show considerable metabolic and phylogenetic overlap down to the genus level despite geographic distance and slightly different seafloor basalt mineralogy.
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spelling pubmed-46798712016-01-05 Similar Microbial Communities Found on Two Distant Seafloor Basalts Singer, Esther Chong, Lauren S. Heidelberg, John F. Edwards, Katrina J. Front Microbiol Microbiology The oceanic crust forms two thirds of the Earth’s surface and hosts a large phylogenetic and functional diversity of microorganisms. While advances have been made in the sedimentary realm, our understanding of the igneous rock portion as a microbial habitat has remained limited. We present the first comparative metagenomic microbial community analysis from ocean floor basalt environments at the Lō’ihi Seamount, Hawai’i, and the East Pacific Rise (EPR; 9°N). Phylogenetic analysis indicates the presence of a total of 43 bacterial and archaeal mono-phyletic groups, dominated by Alpha- and Gammaproteobacteria, as well as Thaumarchaeota. Functional gene analysis suggests that these Thaumarchaeota play an important role in ammonium oxidation on seafloor basalts. In addition to ammonium oxidation, the seafloor basalt habitat reveals a wide spectrum of other metabolic potentials, including CO(2) fixation, denitrification, dissimilatory sulfate reduction, and sulfur oxidation. Basalt communities from Lō’ihi and the EPR show considerable metabolic and phylogenetic overlap down to the genus level despite geographic distance and slightly different seafloor basalt mineralogy. Frontiers Media S.A. 2015-12-16 /pmc/articles/PMC4679871/ /pubmed/26733957 http://dx.doi.org/10.3389/fmicb.2015.01409 Text en Copyright © 2015 Singer, Chong, Heidelberg and Edwards. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
Singer, Esther
Chong, Lauren S.
Heidelberg, John F.
Edwards, Katrina J.
Similar Microbial Communities Found on Two Distant Seafloor Basalts
title Similar Microbial Communities Found on Two Distant Seafloor Basalts
title_full Similar Microbial Communities Found on Two Distant Seafloor Basalts
title_fullStr Similar Microbial Communities Found on Two Distant Seafloor Basalts
title_full_unstemmed Similar Microbial Communities Found on Two Distant Seafloor Basalts
title_short Similar Microbial Communities Found on Two Distant Seafloor Basalts
title_sort similar microbial communities found on two distant seafloor basalts
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4679871/
https://www.ncbi.nlm.nih.gov/pubmed/26733957
http://dx.doi.org/10.3389/fmicb.2015.01409
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