Cargando…
RNF: a general framework to evaluate NGS read mappers
Motivation: Read simulators combined with alignment evaluation tools provide the most straightforward way to evaluate and compare mappers. Simulation of reads is accompanied by information about their positions in the source genome. This information is then used to evaluate alignments produced by th...
Autores principales: | Břinda, Karel, Boeva, Valentina, Kucherov, Gregory |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2016
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4681991/ https://www.ncbi.nlm.nih.gov/pubmed/26353839 http://dx.doi.org/10.1093/bioinformatics/btv524 |
Ejemplares similares
-
MMR: a tool for read multi-mapper resolution
por: Kahles, André, et al.
Publicado: (2016) -
Operon-mapper: a web server for precise operon identification in bacterial and archaeal genomes
por: Taboada, Blanca, et al.
Publicado: (2018) -
NGS-pipe: a flexible, easily extendable and highly configurable framework for NGS analysis
por: Singer, Jochen, et al.
Publicado: (2018) -
TDFragMapper: a visualization tool for evaluating experimental parameters in top-down proteomics
por: Dhenin, Jonathan, et al.
Publicado: (2021) -
Orione, a web-based framework for NGS analysis in microbiology
por: Cuccuru, Gianmauro, et al.
Publicado: (2014)