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Genome Analysis of Phage SMSAP5 as Candidate of Biocontrol for Staphylococcus aureus
In this study, we reported the morphogenetic analysis and genome sequence by genomic analysis of the newly isolated staphylococcal phage SMSAP5 from soil of slaughterhouses for cattle. Based on transmission electron microscopy evident morphology, phage SMSAP5 belonged to the Siphoviridae family. Pha...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Korean Society for Food Science of Animal Resources
2015
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4682501/ https://www.ncbi.nlm.nih.gov/pubmed/26761804 http://dx.doi.org/10.5851/kosfa.2015.35.1.86 |
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author | Lee, Young-Duck Park, Jong-Hyun |
author_facet | Lee, Young-Duck Park, Jong-Hyun |
author_sort | Lee, Young-Duck |
collection | PubMed |
description | In this study, we reported the morphogenetic analysis and genome sequence by genomic analysis of the newly isolated staphylococcal phage SMSAP5 from soil of slaughterhouses for cattle. Based on transmission electron microscopy evident morphology, phage SMSAP5 belonged to the Siphoviridae family. Phage SMSAP5 had a double-stranded DNA genome with a length of 45,552 bp and 33 % G+C content. Bioinformatics analysis of the phage genome revealed 43 open reading frames. A blastn search revealed that its nucleotide sequence shared a high degree of similarity with that of the Staphylococcus phage tp310-2. In conclusion, this study is the first report to show the morphological features and the complete genome sequence of the phage SMSAP5 from soil of slaughterhouses for cattle. |
format | Online Article Text |
id | pubmed-4682501 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Korean Society for Food Science of Animal Resources |
record_format | MEDLINE/PubMed |
spelling | pubmed-46825012016-01-04 Genome Analysis of Phage SMSAP5 as Candidate of Biocontrol for Staphylococcus aureus Lee, Young-Duck Park, Jong-Hyun Korean J Food Sci Anim Resour Article In this study, we reported the morphogenetic analysis and genome sequence by genomic analysis of the newly isolated staphylococcal phage SMSAP5 from soil of slaughterhouses for cattle. Based on transmission electron microscopy evident morphology, phage SMSAP5 belonged to the Siphoviridae family. Phage SMSAP5 had a double-stranded DNA genome with a length of 45,552 bp and 33 % G+C content. Bioinformatics analysis of the phage genome revealed 43 open reading frames. A blastn search revealed that its nucleotide sequence shared a high degree of similarity with that of the Staphylococcus phage tp310-2. In conclusion, this study is the first report to show the morphological features and the complete genome sequence of the phage SMSAP5 from soil of slaughterhouses for cattle. Korean Society for Food Science of Animal Resources 2015 2015-02-28 /pmc/articles/PMC4682501/ /pubmed/26761804 http://dx.doi.org/10.5851/kosfa.2015.35.1.86 Text en Copyright © 2015, Korean Society for Food Science of Animal Resources http://creativecommons.org/licences/by-nc/4.0 This is an open access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licences/by-nc/4.0) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Article Lee, Young-Duck Park, Jong-Hyun Genome Analysis of Phage SMSAP5 as Candidate of Biocontrol for Staphylococcus aureus |
title | Genome Analysis of Phage SMSAP5 as Candidate of Biocontrol for Staphylococcus aureus |
title_full | Genome Analysis of Phage SMSAP5 as Candidate of Biocontrol for Staphylococcus aureus |
title_fullStr | Genome Analysis of Phage SMSAP5 as Candidate of Biocontrol for Staphylococcus aureus |
title_full_unstemmed | Genome Analysis of Phage SMSAP5 as Candidate of Biocontrol for Staphylococcus aureus |
title_short | Genome Analysis of Phage SMSAP5 as Candidate of Biocontrol for Staphylococcus aureus |
title_sort | genome analysis of phage smsap5 as candidate of biocontrol for staphylococcus aureus |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4682501/ https://www.ncbi.nlm.nih.gov/pubmed/26761804 http://dx.doi.org/10.5851/kosfa.2015.35.1.86 |
work_keys_str_mv | AT leeyoungduck genomeanalysisofphagesmsap5ascandidateofbiocontrolforstaphylococcusaureus AT parkjonghyun genomeanalysisofphagesmsap5ascandidateofbiocontrolforstaphylococcusaureus |