Cargando…

Total Wiring Length Minimization of C. elegans Neural Network: A Constrained Optimization Approach

Using the most recent data on the connectivity of the C. elegans neural network, we find optimal two-dimensional positions of interneurons that minimize the total wiring length provided that the positions of motor and sensory neurons are fixed. The rationale behind fixing motor and sensory neurons i...

Descripción completa

Detalles Bibliográficos
Autores principales: Gushchin, Andrey, Tang, Ao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4682822/
https://www.ncbi.nlm.nih.gov/pubmed/26659722
http://dx.doi.org/10.1371/journal.pone.0145029
_version_ 1782405928807563264
author Gushchin, Andrey
Tang, Ao
author_facet Gushchin, Andrey
Tang, Ao
author_sort Gushchin, Andrey
collection PubMed
description Using the most recent data on the connectivity of the C. elegans neural network, we find optimal two-dimensional positions of interneurons that minimize the total wiring length provided that the positions of motor and sensory neurons are fixed. The rationale behind fixing motor and sensory neurons is the following: while positions of motor and sensory neurons can be influenced by the locations of muscles and sensory organs they are attached to, the main function of interneurons is to connect other neurons, and their placement could try to minimize the wiring length. Solutions for l (1), l (2) and squared l (2)–norm were obtained. For the Euclidean norm l (2), the relative and absolute difference between the real and optimal total wiring lengths is minimal among these functions of distance. Additional network constraints were discussed such as assignment of different weights to electrical or chemical connections, fixation of “tail” interneurons, minimal interneural distance limitation, and others. These constraints were compared by their influence on the optimal positions of interneurons.
format Online
Article
Text
id pubmed-4682822
institution National Center for Biotechnology Information
language English
publishDate 2015
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-46828222015-12-31 Total Wiring Length Minimization of C. elegans Neural Network: A Constrained Optimization Approach Gushchin, Andrey Tang, Ao PLoS One Research Article Using the most recent data on the connectivity of the C. elegans neural network, we find optimal two-dimensional positions of interneurons that minimize the total wiring length provided that the positions of motor and sensory neurons are fixed. The rationale behind fixing motor and sensory neurons is the following: while positions of motor and sensory neurons can be influenced by the locations of muscles and sensory organs they are attached to, the main function of interneurons is to connect other neurons, and their placement could try to minimize the wiring length. Solutions for l (1), l (2) and squared l (2)–norm were obtained. For the Euclidean norm l (2), the relative and absolute difference between the real and optimal total wiring lengths is minimal among these functions of distance. Additional network constraints were discussed such as assignment of different weights to electrical or chemical connections, fixation of “tail” interneurons, minimal interneural distance limitation, and others. These constraints were compared by their influence on the optimal positions of interneurons. Public Library of Science 2015-12-14 /pmc/articles/PMC4682822/ /pubmed/26659722 http://dx.doi.org/10.1371/journal.pone.0145029 Text en © 2015 Gushchin, Tang http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Gushchin, Andrey
Tang, Ao
Total Wiring Length Minimization of C. elegans Neural Network: A Constrained Optimization Approach
title Total Wiring Length Minimization of C. elegans Neural Network: A Constrained Optimization Approach
title_full Total Wiring Length Minimization of C. elegans Neural Network: A Constrained Optimization Approach
title_fullStr Total Wiring Length Minimization of C. elegans Neural Network: A Constrained Optimization Approach
title_full_unstemmed Total Wiring Length Minimization of C. elegans Neural Network: A Constrained Optimization Approach
title_short Total Wiring Length Minimization of C. elegans Neural Network: A Constrained Optimization Approach
title_sort total wiring length minimization of c. elegans neural network: a constrained optimization approach
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4682822/
https://www.ncbi.nlm.nih.gov/pubmed/26659722
http://dx.doi.org/10.1371/journal.pone.0145029
work_keys_str_mv AT gushchinandrey totalwiringlengthminimizationofcelegansneuralnetworkaconstrainedoptimizationapproach
AT tangao totalwiringlengthminimizationofcelegansneuralnetworkaconstrainedoptimizationapproach