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Total Wiring Length Minimization of C. elegans Neural Network: A Constrained Optimization Approach
Using the most recent data on the connectivity of the C. elegans neural network, we find optimal two-dimensional positions of interneurons that minimize the total wiring length provided that the positions of motor and sensory neurons are fixed. The rationale behind fixing motor and sensory neurons i...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4682822/ https://www.ncbi.nlm.nih.gov/pubmed/26659722 http://dx.doi.org/10.1371/journal.pone.0145029 |
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author | Gushchin, Andrey Tang, Ao |
author_facet | Gushchin, Andrey Tang, Ao |
author_sort | Gushchin, Andrey |
collection | PubMed |
description | Using the most recent data on the connectivity of the C. elegans neural network, we find optimal two-dimensional positions of interneurons that minimize the total wiring length provided that the positions of motor and sensory neurons are fixed. The rationale behind fixing motor and sensory neurons is the following: while positions of motor and sensory neurons can be influenced by the locations of muscles and sensory organs they are attached to, the main function of interneurons is to connect other neurons, and their placement could try to minimize the wiring length. Solutions for l (1), l (2) and squared l (2)–norm were obtained. For the Euclidean norm l (2), the relative and absolute difference between the real and optimal total wiring lengths is minimal among these functions of distance. Additional network constraints were discussed such as assignment of different weights to electrical or chemical connections, fixation of “tail” interneurons, minimal interneural distance limitation, and others. These constraints were compared by their influence on the optimal positions of interneurons. |
format | Online Article Text |
id | pubmed-4682822 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-46828222015-12-31 Total Wiring Length Minimization of C. elegans Neural Network: A Constrained Optimization Approach Gushchin, Andrey Tang, Ao PLoS One Research Article Using the most recent data on the connectivity of the C. elegans neural network, we find optimal two-dimensional positions of interneurons that minimize the total wiring length provided that the positions of motor and sensory neurons are fixed. The rationale behind fixing motor and sensory neurons is the following: while positions of motor and sensory neurons can be influenced by the locations of muscles and sensory organs they are attached to, the main function of interneurons is to connect other neurons, and their placement could try to minimize the wiring length. Solutions for l (1), l (2) and squared l (2)–norm were obtained. For the Euclidean norm l (2), the relative and absolute difference between the real and optimal total wiring lengths is minimal among these functions of distance. Additional network constraints were discussed such as assignment of different weights to electrical or chemical connections, fixation of “tail” interneurons, minimal interneural distance limitation, and others. These constraints were compared by their influence on the optimal positions of interneurons. Public Library of Science 2015-12-14 /pmc/articles/PMC4682822/ /pubmed/26659722 http://dx.doi.org/10.1371/journal.pone.0145029 Text en © 2015 Gushchin, Tang http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Gushchin, Andrey Tang, Ao Total Wiring Length Minimization of C. elegans Neural Network: A Constrained Optimization Approach |
title | Total Wiring Length Minimization of C. elegans Neural Network: A Constrained Optimization Approach |
title_full | Total Wiring Length Minimization of C. elegans Neural Network: A Constrained Optimization Approach |
title_fullStr | Total Wiring Length Minimization of C. elegans Neural Network: A Constrained Optimization Approach |
title_full_unstemmed | Total Wiring Length Minimization of C. elegans Neural Network: A Constrained Optimization Approach |
title_short | Total Wiring Length Minimization of C. elegans Neural Network: A Constrained Optimization Approach |
title_sort | total wiring length minimization of c. elegans neural network: a constrained optimization approach |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4682822/ https://www.ncbi.nlm.nih.gov/pubmed/26659722 http://dx.doi.org/10.1371/journal.pone.0145029 |
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