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Mono-Exponential Fitting in T2-Relaxometry: Relevance of Offset and First Echo
INTRODUCTION: T2 relaxometry has become an important tool in quantitative MRI. Little focus has been put on the effect of the refocusing flip angle upon the offset parameter, which was introduced to account for a signal floor due to noise or to long T2 components. The aim of this study was to show t...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4683054/ https://www.ncbi.nlm.nih.gov/pubmed/26678918 http://dx.doi.org/10.1371/journal.pone.0145255 |
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author | Milford, David Rosbach, Nicolas Bendszus, Martin Heiland, Sabine |
author_facet | Milford, David Rosbach, Nicolas Bendszus, Martin Heiland, Sabine |
author_sort | Milford, David |
collection | PubMed |
description | INTRODUCTION: T2 relaxometry has become an important tool in quantitative MRI. Little focus has been put on the effect of the refocusing flip angle upon the offset parameter, which was introduced to account for a signal floor due to noise or to long T2 components. The aim of this study was to show that B1 imperfections contribute significantly to the offset. We further introduce a simple method to reduce the systematic error in T2 by discarding the first echo and using the offset fitting approach. MATERIALS AND METHODS: Signal curves of T2 relaxometry were simulated based on extended phase graph theory and evaluated for 4 different methods (inclusion and exclusion of the first echo, while fitting with and without the offset). We further performed T2 relaxometry in a phantom at 9.4T magnetic resonance imaging scanner and used the same methods for post-processing as in the extended phase graph simulated data. Single spin echo sequences were used to determine the correct T2 time. RESULTS: The simulation data showed that the systematic error in T2 and the offset depends on the refocusing pulse, the echo spacing and the echo train length. The systematic error could be reduced by discarding the first echo. Further reduction of the systematic T2 error was reached by using the offset as fitting parameter. The phantom experiments confirmed these findings. CONCLUSION: The fitted offset parameter in T2 relaxometry is influenced by imperfect refocusing pulses. Using the offset as a fitting parameter and discarding the first echo is a fast and easy method to minimize the error in T2, particularly for low to intermediate echo train length. |
format | Online Article Text |
id | pubmed-4683054 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-46830542015-12-31 Mono-Exponential Fitting in T2-Relaxometry: Relevance of Offset and First Echo Milford, David Rosbach, Nicolas Bendszus, Martin Heiland, Sabine PLoS One Research Article INTRODUCTION: T2 relaxometry has become an important tool in quantitative MRI. Little focus has been put on the effect of the refocusing flip angle upon the offset parameter, which was introduced to account for a signal floor due to noise or to long T2 components. The aim of this study was to show that B1 imperfections contribute significantly to the offset. We further introduce a simple method to reduce the systematic error in T2 by discarding the first echo and using the offset fitting approach. MATERIALS AND METHODS: Signal curves of T2 relaxometry were simulated based on extended phase graph theory and evaluated for 4 different methods (inclusion and exclusion of the first echo, while fitting with and without the offset). We further performed T2 relaxometry in a phantom at 9.4T magnetic resonance imaging scanner and used the same methods for post-processing as in the extended phase graph simulated data. Single spin echo sequences were used to determine the correct T2 time. RESULTS: The simulation data showed that the systematic error in T2 and the offset depends on the refocusing pulse, the echo spacing and the echo train length. The systematic error could be reduced by discarding the first echo. Further reduction of the systematic T2 error was reached by using the offset as fitting parameter. The phantom experiments confirmed these findings. CONCLUSION: The fitted offset parameter in T2 relaxometry is influenced by imperfect refocusing pulses. Using the offset as a fitting parameter and discarding the first echo is a fast and easy method to minimize the error in T2, particularly for low to intermediate echo train length. Public Library of Science 2015-12-17 /pmc/articles/PMC4683054/ /pubmed/26678918 http://dx.doi.org/10.1371/journal.pone.0145255 Text en © 2015 Milford et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Milford, David Rosbach, Nicolas Bendszus, Martin Heiland, Sabine Mono-Exponential Fitting in T2-Relaxometry: Relevance of Offset and First Echo |
title | Mono-Exponential Fitting in T2-Relaxometry: Relevance of Offset and First Echo |
title_full | Mono-Exponential Fitting in T2-Relaxometry: Relevance of Offset and First Echo |
title_fullStr | Mono-Exponential Fitting in T2-Relaxometry: Relevance of Offset and First Echo |
title_full_unstemmed | Mono-Exponential Fitting in T2-Relaxometry: Relevance of Offset and First Echo |
title_short | Mono-Exponential Fitting in T2-Relaxometry: Relevance of Offset and First Echo |
title_sort | mono-exponential fitting in t2-relaxometry: relevance of offset and first echo |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4683054/ https://www.ncbi.nlm.nih.gov/pubmed/26678918 http://dx.doi.org/10.1371/journal.pone.0145255 |
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