Cargando…

Classification of autistic individuals and controls using cross-task characterization of fMRI activity

Multivariate pattern analysis (MVPA) has been applied successfully to task-based and resting-based fMRI recordings to investigate which neural markers distinguish individuals with autistic spectrum disorders (ASD) from controls. While most studies have focused on brain connectivity during resting st...

Descripción completa

Detalles Bibliográficos
Autores principales: Chanel, Guillaume, Pichon, Swann, Conty, Laurence, Berthoz, Sylvie, Chevallier, Coralie, Grèzes, Julie
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4683429/
https://www.ncbi.nlm.nih.gov/pubmed/26793434
http://dx.doi.org/10.1016/j.nicl.2015.11.010
_version_ 1782406019770482688
author Chanel, Guillaume
Pichon, Swann
Conty, Laurence
Berthoz, Sylvie
Chevallier, Coralie
Grèzes, Julie
author_facet Chanel, Guillaume
Pichon, Swann
Conty, Laurence
Berthoz, Sylvie
Chevallier, Coralie
Grèzes, Julie
author_sort Chanel, Guillaume
collection PubMed
description Multivariate pattern analysis (MVPA) has been applied successfully to task-based and resting-based fMRI recordings to investigate which neural markers distinguish individuals with autistic spectrum disorders (ASD) from controls. While most studies have focused on brain connectivity during resting state episodes and regions of interest approaches (ROI), a wealth of task-based fMRI datasets have been acquired in these populations in the last decade. This calls for techniques that can leverage information not only from a single dataset, but from several existing datasets that might share some common features and biomarkers. We propose a fully data-driven (voxel-based) approach that we apply to two different fMRI experiments with social stimuli (faces and bodies). The method, based on Support Vector Machines (SVMs) and Recursive Feature Elimination (RFE), is first trained for each experiment independently and each output is then combined to obtain a final classification output. Second, this RFE output is used to determine which voxels are most often selected for classification to generate maps of significant discriminative activity. Finally, to further explore the clinical validity of the approach, we correlate phenotypic information with obtained classifier scores. The results reveal good classification accuracy (range between 69% and 92.3%). Moreover, we were able to identify discriminative activity patterns pertaining to the social brain without relying on a priori ROI definitions. Finally, social motivation was the only dimension which correlated with classifier scores, suggesting that it is the main dimension captured by the classifiers. Altogether, we believe that the present RFE method proves to be efficient and may help identifying relevant biomarkers by taking advantage of acquired task-based fMRI datasets in psychiatric populations.
format Online
Article
Text
id pubmed-4683429
institution National Center for Biotechnology Information
language English
publishDate 2015
publisher Elsevier
record_format MEDLINE/PubMed
spelling pubmed-46834292016-01-20 Classification of autistic individuals and controls using cross-task characterization of fMRI activity Chanel, Guillaume Pichon, Swann Conty, Laurence Berthoz, Sylvie Chevallier, Coralie Grèzes, Julie Neuroimage Clin Regular Article Multivariate pattern analysis (MVPA) has been applied successfully to task-based and resting-based fMRI recordings to investigate which neural markers distinguish individuals with autistic spectrum disorders (ASD) from controls. While most studies have focused on brain connectivity during resting state episodes and regions of interest approaches (ROI), a wealth of task-based fMRI datasets have been acquired in these populations in the last decade. This calls for techniques that can leverage information not only from a single dataset, but from several existing datasets that might share some common features and biomarkers. We propose a fully data-driven (voxel-based) approach that we apply to two different fMRI experiments with social stimuli (faces and bodies). The method, based on Support Vector Machines (SVMs) and Recursive Feature Elimination (RFE), is first trained for each experiment independently and each output is then combined to obtain a final classification output. Second, this RFE output is used to determine which voxels are most often selected for classification to generate maps of significant discriminative activity. Finally, to further explore the clinical validity of the approach, we correlate phenotypic information with obtained classifier scores. The results reveal good classification accuracy (range between 69% and 92.3%). Moreover, we were able to identify discriminative activity patterns pertaining to the social brain without relying on a priori ROI definitions. Finally, social motivation was the only dimension which correlated with classifier scores, suggesting that it is the main dimension captured by the classifiers. Altogether, we believe that the present RFE method proves to be efficient and may help identifying relevant biomarkers by taking advantage of acquired task-based fMRI datasets in psychiatric populations. Elsevier 2015-11-17 /pmc/articles/PMC4683429/ /pubmed/26793434 http://dx.doi.org/10.1016/j.nicl.2015.11.010 Text en © 2015 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Regular Article
Chanel, Guillaume
Pichon, Swann
Conty, Laurence
Berthoz, Sylvie
Chevallier, Coralie
Grèzes, Julie
Classification of autistic individuals and controls using cross-task characterization of fMRI activity
title Classification of autistic individuals and controls using cross-task characterization of fMRI activity
title_full Classification of autistic individuals and controls using cross-task characterization of fMRI activity
title_fullStr Classification of autistic individuals and controls using cross-task characterization of fMRI activity
title_full_unstemmed Classification of autistic individuals and controls using cross-task characterization of fMRI activity
title_short Classification of autistic individuals and controls using cross-task characterization of fMRI activity
title_sort classification of autistic individuals and controls using cross-task characterization of fmri activity
topic Regular Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4683429/
https://www.ncbi.nlm.nih.gov/pubmed/26793434
http://dx.doi.org/10.1016/j.nicl.2015.11.010
work_keys_str_mv AT chanelguillaume classificationofautisticindividualsandcontrolsusingcrosstaskcharacterizationoffmriactivity
AT pichonswann classificationofautisticindividualsandcontrolsusingcrosstaskcharacterizationoffmriactivity
AT contylaurence classificationofautisticindividualsandcontrolsusingcrosstaskcharacterizationoffmriactivity
AT berthozsylvie classificationofautisticindividualsandcontrolsusingcrosstaskcharacterizationoffmriactivity
AT chevalliercoralie classificationofautisticindividualsandcontrolsusingcrosstaskcharacterizationoffmriactivity
AT grezesjulie classificationofautisticindividualsandcontrolsusingcrosstaskcharacterizationoffmriactivity