Cargando…
Global Analysis of Predicted G Protein−Coupled Receptor Genes in the Filamentous Fungus, Neurospora crassa
G protein−coupled receptors (GPCRs) regulate facets of growth, development, and environmental sensing in eukaryotes, including filamentous fungi. The largest predicted GPCR class in these organisms is the Pth11-related, with members similar to a protein required for disease in the plant pathogen Mag...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Genetics Society of America
2015
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4683645/ https://www.ncbi.nlm.nih.gov/pubmed/26464358 http://dx.doi.org/10.1534/g3.115.020974 |
_version_ | 1782406058101178368 |
---|---|
author | Cabrera, Ilva E. Pacentine, Itallia V. Lim, Andrew Guerrero, Nayeli Krystofova, Svetlana Li, Liande Michkov, Alexander V. Servin, Jacqueline A. Ahrendt, Steven R. Carrillo, Alexander J. Davidson, Liza M. Barsoum, Andrew H. Cao, Jackie Castillo, Ronald Chen, Wan-Ching Dinkchian, Alex Kim, Stephanie Kitada, Sho M. Lai, Taffani H. Mach, Ashley Malekyan, Cristin Moua, Toua R. Torres, Carlos Rojas Yamamoto, Alaina Borkovich, Katherine A. |
author_facet | Cabrera, Ilva E. Pacentine, Itallia V. Lim, Andrew Guerrero, Nayeli Krystofova, Svetlana Li, Liande Michkov, Alexander V. Servin, Jacqueline A. Ahrendt, Steven R. Carrillo, Alexander J. Davidson, Liza M. Barsoum, Andrew H. Cao, Jackie Castillo, Ronald Chen, Wan-Ching Dinkchian, Alex Kim, Stephanie Kitada, Sho M. Lai, Taffani H. Mach, Ashley Malekyan, Cristin Moua, Toua R. Torres, Carlos Rojas Yamamoto, Alaina Borkovich, Katherine A. |
author_sort | Cabrera, Ilva E. |
collection | PubMed |
description | G protein−coupled receptors (GPCRs) regulate facets of growth, development, and environmental sensing in eukaryotes, including filamentous fungi. The largest predicted GPCR class in these organisms is the Pth11-related, with members similar to a protein required for disease in the plant pathogen Magnaporthe oryzae. However, the Pth11-related class has not been functionally studied in any filamentous fungal species. Here, we analyze phenotypes in available mutants for 36 GPCR genes, including 20 Pth11-related, in the model filamentous fungus Neurospora crassa. We also investigate patterns of gene expression for all 43 predicted GPCR genes in available datasets. A total of 17 mutants (47%) possessed at least one growth or developmental phenotype. We identified 18 mutants (56%) with chemical sensitivity or nutritional phenotypes (11 uniquely), bringing the total number of mutants with at least one defect to 28 (78%), including 15 mutants (75%) in the Pth11-related class. Gene expression trends for GPCR genes correlated with the phenotypes observed for many mutants and also suggested overlapping functions for several groups of co-transcribed genes. Several members of the Pth11-related class have phenotypes and/or are differentially expressed on cellulose, suggesting a possible role for this gene family in plant cell wall sensing or utilization. |
format | Online Article Text |
id | pubmed-4683645 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Genetics Society of America |
record_format | MEDLINE/PubMed |
spelling | pubmed-46836452015-12-18 Global Analysis of Predicted G Protein−Coupled Receptor Genes in the Filamentous Fungus, Neurospora crassa Cabrera, Ilva E. Pacentine, Itallia V. Lim, Andrew Guerrero, Nayeli Krystofova, Svetlana Li, Liande Michkov, Alexander V. Servin, Jacqueline A. Ahrendt, Steven R. Carrillo, Alexander J. Davidson, Liza M. Barsoum, Andrew H. Cao, Jackie Castillo, Ronald Chen, Wan-Ching Dinkchian, Alex Kim, Stephanie Kitada, Sho M. Lai, Taffani H. Mach, Ashley Malekyan, Cristin Moua, Toua R. Torres, Carlos Rojas Yamamoto, Alaina Borkovich, Katherine A. G3 (Bethesda) Investigations G protein−coupled receptors (GPCRs) regulate facets of growth, development, and environmental sensing in eukaryotes, including filamentous fungi. The largest predicted GPCR class in these organisms is the Pth11-related, with members similar to a protein required for disease in the plant pathogen Magnaporthe oryzae. However, the Pth11-related class has not been functionally studied in any filamentous fungal species. Here, we analyze phenotypes in available mutants for 36 GPCR genes, including 20 Pth11-related, in the model filamentous fungus Neurospora crassa. We also investigate patterns of gene expression for all 43 predicted GPCR genes in available datasets. A total of 17 mutants (47%) possessed at least one growth or developmental phenotype. We identified 18 mutants (56%) with chemical sensitivity or nutritional phenotypes (11 uniquely), bringing the total number of mutants with at least one defect to 28 (78%), including 15 mutants (75%) in the Pth11-related class. Gene expression trends for GPCR genes correlated with the phenotypes observed for many mutants and also suggested overlapping functions for several groups of co-transcribed genes. Several members of the Pth11-related class have phenotypes and/or are differentially expressed on cellulose, suggesting a possible role for this gene family in plant cell wall sensing or utilization. Genetics Society of America 2015-10-09 /pmc/articles/PMC4683645/ /pubmed/26464358 http://dx.doi.org/10.1534/g3.115.020974 Text en Copyright © 2015 Cabrera et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Investigations Cabrera, Ilva E. Pacentine, Itallia V. Lim, Andrew Guerrero, Nayeli Krystofova, Svetlana Li, Liande Michkov, Alexander V. Servin, Jacqueline A. Ahrendt, Steven R. Carrillo, Alexander J. Davidson, Liza M. Barsoum, Andrew H. Cao, Jackie Castillo, Ronald Chen, Wan-Ching Dinkchian, Alex Kim, Stephanie Kitada, Sho M. Lai, Taffani H. Mach, Ashley Malekyan, Cristin Moua, Toua R. Torres, Carlos Rojas Yamamoto, Alaina Borkovich, Katherine A. Global Analysis of Predicted G Protein−Coupled Receptor Genes in the Filamentous Fungus, Neurospora crassa |
title | Global Analysis of Predicted G Protein−Coupled Receptor Genes in the Filamentous Fungus, Neurospora crassa |
title_full | Global Analysis of Predicted G Protein−Coupled Receptor Genes in the Filamentous Fungus, Neurospora crassa |
title_fullStr | Global Analysis of Predicted G Protein−Coupled Receptor Genes in the Filamentous Fungus, Neurospora crassa |
title_full_unstemmed | Global Analysis of Predicted G Protein−Coupled Receptor Genes in the Filamentous Fungus, Neurospora crassa |
title_short | Global Analysis of Predicted G Protein−Coupled Receptor Genes in the Filamentous Fungus, Neurospora crassa |
title_sort | global analysis of predicted g protein−coupled receptor genes in the filamentous fungus, neurospora crassa |
topic | Investigations |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4683645/ https://www.ncbi.nlm.nih.gov/pubmed/26464358 http://dx.doi.org/10.1534/g3.115.020974 |
work_keys_str_mv | AT cabrerailvae globalanalysisofpredictedgproteincoupledreceptorgenesinthefilamentousfungusneurosporacrassa AT pacentineitalliav globalanalysisofpredictedgproteincoupledreceptorgenesinthefilamentousfungusneurosporacrassa AT limandrew globalanalysisofpredictedgproteincoupledreceptorgenesinthefilamentousfungusneurosporacrassa AT guerreronayeli globalanalysisofpredictedgproteincoupledreceptorgenesinthefilamentousfungusneurosporacrassa AT krystofovasvetlana globalanalysisofpredictedgproteincoupledreceptorgenesinthefilamentousfungusneurosporacrassa AT liliande globalanalysisofpredictedgproteincoupledreceptorgenesinthefilamentousfungusneurosporacrassa AT michkovalexanderv globalanalysisofpredictedgproteincoupledreceptorgenesinthefilamentousfungusneurosporacrassa AT servinjacquelinea globalanalysisofpredictedgproteincoupledreceptorgenesinthefilamentousfungusneurosporacrassa AT ahrendtstevenr globalanalysisofpredictedgproteincoupledreceptorgenesinthefilamentousfungusneurosporacrassa AT carrilloalexanderj globalanalysisofpredictedgproteincoupledreceptorgenesinthefilamentousfungusneurosporacrassa AT davidsonlizam globalanalysisofpredictedgproteincoupledreceptorgenesinthefilamentousfungusneurosporacrassa AT barsoumandrewh globalanalysisofpredictedgproteincoupledreceptorgenesinthefilamentousfungusneurosporacrassa AT caojackie globalanalysisofpredictedgproteincoupledreceptorgenesinthefilamentousfungusneurosporacrassa AT castilloronald globalanalysisofpredictedgproteincoupledreceptorgenesinthefilamentousfungusneurosporacrassa AT chenwanching globalanalysisofpredictedgproteincoupledreceptorgenesinthefilamentousfungusneurosporacrassa AT dinkchianalex globalanalysisofpredictedgproteincoupledreceptorgenesinthefilamentousfungusneurosporacrassa AT kimstephanie globalanalysisofpredictedgproteincoupledreceptorgenesinthefilamentousfungusneurosporacrassa AT kitadashom globalanalysisofpredictedgproteincoupledreceptorgenesinthefilamentousfungusneurosporacrassa AT laitaffanih globalanalysisofpredictedgproteincoupledreceptorgenesinthefilamentousfungusneurosporacrassa AT machashley globalanalysisofpredictedgproteincoupledreceptorgenesinthefilamentousfungusneurosporacrassa AT malekyancristin globalanalysisofpredictedgproteincoupledreceptorgenesinthefilamentousfungusneurosporacrassa AT mouatouar globalanalysisofpredictedgproteincoupledreceptorgenesinthefilamentousfungusneurosporacrassa AT torrescarlosrojas globalanalysisofpredictedgproteincoupledreceptorgenesinthefilamentousfungusneurosporacrassa AT yamamotoalaina globalanalysisofpredictedgproteincoupledreceptorgenesinthefilamentousfungusneurosporacrassa AT borkovichkatherinea globalanalysisofpredictedgproteincoupledreceptorgenesinthefilamentousfungusneurosporacrassa |