High-Specificity Targeted Functional Profiling in Microbial Communities with ShortBRED

Profiling microbial community function from metagenomic sequencing data remains a computationally challenging problem. Mapping millions of DNA reads from such samples to reference protein databases requires long run-times, and short read lengths can result in spurious hits to unrelated proteins (los...

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Detalles Bibliográficos
Autores principales: Kaminski, James, Gibson, Molly K., Franzosa, Eric A., Segata, Nicola, Dantas, Gautam, Huttenhower, Curtis
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2015
Materias:
Research Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4684307/
https://www.ncbi.nlm.nih.gov/pubmed/26682918
http://dx.doi.org/10.1371/journal.pcbi.1004557

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4684307/
https://www.ncbi.nlm.nih.gov/pubmed/26682918
http://dx.doi.org/10.1371/journal.pcbi.1004557

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