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Empirical Bayes for Group (DCM) Studies: A Reproducibility Study
This technical note addresses some key reproducibility issues in the dynamic causal modelling of group studies of event related potentials. Specifically, we address the reproducibility of Bayesian model comparison (and inferences about model parameters) from three important perspectives namely: (i)...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4686807/ https://www.ncbi.nlm.nih.gov/pubmed/26733846 http://dx.doi.org/10.3389/fnhum.2015.00670 |
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author | Litvak, Vladimir Garrido, Marta Zeidman, Peter Friston, Karl |
author_facet | Litvak, Vladimir Garrido, Marta Zeidman, Peter Friston, Karl |
author_sort | Litvak, Vladimir |
collection | PubMed |
description | This technical note addresses some key reproducibility issues in the dynamic causal modelling of group studies of event related potentials. Specifically, we address the reproducibility of Bayesian model comparison (and inferences about model parameters) from three important perspectives namely: (i) reproducibility with independent data (obtained by averaging over odd and even trials); (ii) reproducibility over formally distinct models (namely, classic ERP and canonical microcircuit or CMC models); and (iii) reproducibility over inversion schemes (inversion of the grand average and estimation of group effects using empirical Bayes). Our hope was to illustrate the degree of reproducibility one can expect from DCM when analysing different data, under different models with different analyses. |
format | Online Article Text |
id | pubmed-4686807 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-46868072016-01-05 Empirical Bayes for Group (DCM) Studies: A Reproducibility Study Litvak, Vladimir Garrido, Marta Zeidman, Peter Friston, Karl Front Hum Neurosci Neuroscience This technical note addresses some key reproducibility issues in the dynamic causal modelling of group studies of event related potentials. Specifically, we address the reproducibility of Bayesian model comparison (and inferences about model parameters) from three important perspectives namely: (i) reproducibility with independent data (obtained by averaging over odd and even trials); (ii) reproducibility over formally distinct models (namely, classic ERP and canonical microcircuit or CMC models); and (iii) reproducibility over inversion schemes (inversion of the grand average and estimation of group effects using empirical Bayes). Our hope was to illustrate the degree of reproducibility one can expect from DCM when analysing different data, under different models with different analyses. Frontiers Media S.A. 2015-12-22 /pmc/articles/PMC4686807/ /pubmed/26733846 http://dx.doi.org/10.3389/fnhum.2015.00670 Text en Copyright © 2015 Litvak, Garrido, Zeidman and Friston. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution and reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Neuroscience Litvak, Vladimir Garrido, Marta Zeidman, Peter Friston, Karl Empirical Bayes for Group (DCM) Studies: A Reproducibility Study |
title | Empirical Bayes for Group (DCM) Studies: A Reproducibility Study |
title_full | Empirical Bayes for Group (DCM) Studies: A Reproducibility Study |
title_fullStr | Empirical Bayes for Group (DCM) Studies: A Reproducibility Study |
title_full_unstemmed | Empirical Bayes for Group (DCM) Studies: A Reproducibility Study |
title_short | Empirical Bayes for Group (DCM) Studies: A Reproducibility Study |
title_sort | empirical bayes for group (dcm) studies: a reproducibility study |
topic | Neuroscience |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4686807/ https://www.ncbi.nlm.nih.gov/pubmed/26733846 http://dx.doi.org/10.3389/fnhum.2015.00670 |
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