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Sequence Analysis and Evolutionary Studies of Reelin Proteins

The reelin gene is conserved across many vertebrate species, including humans. The protein product of this gene plays several important roles in early brain development and regulation of neural network plasticity of a matured brain structure. With an extended structure of 3461 amino acid sequences,...

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Autores principales: Manoharan, Malini, Muhammad, Sayyed Auwn, Sowdhamini, Ramanathan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Libertas Academica 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4687978/
https://www.ncbi.nlm.nih.gov/pubmed/26715843
http://dx.doi.org/10.4137/BBI.S26530
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author Manoharan, Malini
Muhammad, Sayyed Auwn
Sowdhamini, Ramanathan
author_facet Manoharan, Malini
Muhammad, Sayyed Auwn
Sowdhamini, Ramanathan
author_sort Manoharan, Malini
collection PubMed
description The reelin gene is conserved across many vertebrate species, including humans. The protein product of this gene plays several important roles in early brain development and regulation of neural network plasticity of a matured brain structure. With an extended structure of 3461 amino acid sequences, consisting of eight reelin repeats, the human reelin sequence stands out as an exceptional model for evolutionary studies. In this study, sequence analysis of the human reelin and its homologues and reelin sequences from 104 other species is described in detail. Interesting sequence conservation patterns of individual repeats have been highlighted. Sequence phylogeny of the reelin sequences indicates a pattern similar to the evolution of the species, thereby serving as a highly conserved family for evolutionary purposes. Multiple sequence alignment of different reelin domain repeats, derived from homologues, suggests specific functions for individual repeats and high sequence conservation across reelin repeats from different organisms, albeit with few unusual domain architectures. A three-dimensional structural model of the full-length human reelin is now available that provides clues on residues at the dimer interface.
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spelling pubmed-46879782015-12-29 Sequence Analysis and Evolutionary Studies of Reelin Proteins Manoharan, Malini Muhammad, Sayyed Auwn Sowdhamini, Ramanathan Bioinform Biol Insights Original Research The reelin gene is conserved across many vertebrate species, including humans. The protein product of this gene plays several important roles in early brain development and regulation of neural network plasticity of a matured brain structure. With an extended structure of 3461 amino acid sequences, consisting of eight reelin repeats, the human reelin sequence stands out as an exceptional model for evolutionary studies. In this study, sequence analysis of the human reelin and its homologues and reelin sequences from 104 other species is described in detail. Interesting sequence conservation patterns of individual repeats have been highlighted. Sequence phylogeny of the reelin sequences indicates a pattern similar to the evolution of the species, thereby serving as a highly conserved family for evolutionary purposes. Multiple sequence alignment of different reelin domain repeats, derived from homologues, suggests specific functions for individual repeats and high sequence conservation across reelin repeats from different organisms, albeit with few unusual domain architectures. A three-dimensional structural model of the full-length human reelin is now available that provides clues on residues at the dimer interface. Libertas Academica 2015-12-20 /pmc/articles/PMC4687978/ /pubmed/26715843 http://dx.doi.org/10.4137/BBI.S26530 Text en © 2015 the author(s), publisher and licensee Libertas Academica Ltd. This is an open access article published under the Creative Commons CC-BY-NC 3.0 license.
spellingShingle Original Research
Manoharan, Malini
Muhammad, Sayyed Auwn
Sowdhamini, Ramanathan
Sequence Analysis and Evolutionary Studies of Reelin Proteins
title Sequence Analysis and Evolutionary Studies of Reelin Proteins
title_full Sequence Analysis and Evolutionary Studies of Reelin Proteins
title_fullStr Sequence Analysis and Evolutionary Studies of Reelin Proteins
title_full_unstemmed Sequence Analysis and Evolutionary Studies of Reelin Proteins
title_short Sequence Analysis and Evolutionary Studies of Reelin Proteins
title_sort sequence analysis and evolutionary studies of reelin proteins
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4687978/
https://www.ncbi.nlm.nih.gov/pubmed/26715843
http://dx.doi.org/10.4137/BBI.S26530
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