Cargando…

Elastohydrodynamics and Kinetics of Protein Patterning in the Immunological Synapse

We propose a minimal mathematical model for the physical basis of membrane protein patterning in the immunological synapse (IS), which encompass membrane mechanics, protein binding kinetics and motion, and fluid flow in the synaptic cleft. Our theory leads to simple predictions for the spatial and t...

Descripción completa

Detalles Bibliográficos
Autores principales: Carlson, Andreas, Mahadevan, L.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4689476/
https://www.ncbi.nlm.nih.gov/pubmed/26699430
http://dx.doi.org/10.1371/journal.pcbi.1004481
_version_ 1782406850572976128
author Carlson, Andreas
Mahadevan, L.
author_facet Carlson, Andreas
Mahadevan, L.
author_sort Carlson, Andreas
collection PubMed
description We propose a minimal mathematical model for the physical basis of membrane protein patterning in the immunological synapse (IS), which encompass membrane mechanics, protein binding kinetics and motion, and fluid flow in the synaptic cleft. Our theory leads to simple predictions for the spatial and temporal scales of protein cluster formation, growth and arrest as a function of membrane stiffness, rigidity and kinetics of the adhesive proteins, and the fluid flow in the synaptic cleft. Numerical simulations complement these scaling laws by quantifying the nucleation, growth and stabilization of proteins domains on the size of the cell. Direct comparison with experiment shows that passive elastohydrodynamics and kinetics of protein binding in the synaptic cleft can describe the short-time formation and organization of protein clusters, without evoking any active processes in the cytoskeleton. Despite the apparent complexity of the process, our analysis shows that just two dimensionless parameters characterize the spatial and temporal evolution of the protein pattern: a ratio of membrane elasticity to protein stiffness, and the ratio of a hydrodynamic time scale for fluid flow relative to the protein binding rate. A simple phase diagram encompasses the variety of patterns that can arise.
format Online
Article
Text
id pubmed-4689476
institution National Center for Biotechnology Information
language English
publishDate 2015
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-46894762015-12-31 Elastohydrodynamics and Kinetics of Protein Patterning in the Immunological Synapse Carlson, Andreas Mahadevan, L. PLoS Comput Biol Research Article We propose a minimal mathematical model for the physical basis of membrane protein patterning in the immunological synapse (IS), which encompass membrane mechanics, protein binding kinetics and motion, and fluid flow in the synaptic cleft. Our theory leads to simple predictions for the spatial and temporal scales of protein cluster formation, growth and arrest as a function of membrane stiffness, rigidity and kinetics of the adhesive proteins, and the fluid flow in the synaptic cleft. Numerical simulations complement these scaling laws by quantifying the nucleation, growth and stabilization of proteins domains on the size of the cell. Direct comparison with experiment shows that passive elastohydrodynamics and kinetics of protein binding in the synaptic cleft can describe the short-time formation and organization of protein clusters, without evoking any active processes in the cytoskeleton. Despite the apparent complexity of the process, our analysis shows that just two dimensionless parameters characterize the spatial and temporal evolution of the protein pattern: a ratio of membrane elasticity to protein stiffness, and the ratio of a hydrodynamic time scale for fluid flow relative to the protein binding rate. A simple phase diagram encompasses the variety of patterns that can arise. Public Library of Science 2015-12-23 /pmc/articles/PMC4689476/ /pubmed/26699430 http://dx.doi.org/10.1371/journal.pcbi.1004481 Text en © 2015 Carlson, Mahadevan http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Carlson, Andreas
Mahadevan, L.
Elastohydrodynamics and Kinetics of Protein Patterning in the Immunological Synapse
title Elastohydrodynamics and Kinetics of Protein Patterning in the Immunological Synapse
title_full Elastohydrodynamics and Kinetics of Protein Patterning in the Immunological Synapse
title_fullStr Elastohydrodynamics and Kinetics of Protein Patterning in the Immunological Synapse
title_full_unstemmed Elastohydrodynamics and Kinetics of Protein Patterning in the Immunological Synapse
title_short Elastohydrodynamics and Kinetics of Protein Patterning in the Immunological Synapse
title_sort elastohydrodynamics and kinetics of protein patterning in the immunological synapse
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4689476/
https://www.ncbi.nlm.nih.gov/pubmed/26699430
http://dx.doi.org/10.1371/journal.pcbi.1004481
work_keys_str_mv AT carlsonandreas elastohydrodynamicsandkineticsofproteinpatterningintheimmunologicalsynapse
AT mahadevanl elastohydrodynamicsandkineticsofproteinpatterningintheimmunologicalsynapse