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Dog Tear Film Proteome In-Depth Analysis
In this study, mass spectrometry was used to explore the canine tear proteome. Tear samples were obtained from six healthy dogs, and one-dimensional sodium dodecyl sulphate polyacrylamide gel electrophoresis (1D SDS-PAGE) was used as a first step to separate intact proteins into 17 bands. Each fract...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4689550/ https://www.ncbi.nlm.nih.gov/pubmed/26701646 http://dx.doi.org/10.1371/journal.pone.0144242 |
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author | Winiarczyk, Mateusz Winiarczyk, Dagmara Banach, Tomasz Adaszek, Lukasz Madany, Jacek Mackiewicz, Jerzy Pietras-Ozga, Dorota Winiarczyk, Stanislaw |
author_facet | Winiarczyk, Mateusz Winiarczyk, Dagmara Banach, Tomasz Adaszek, Lukasz Madany, Jacek Mackiewicz, Jerzy Pietras-Ozga, Dorota Winiarczyk, Stanislaw |
author_sort | Winiarczyk, Mateusz |
collection | PubMed |
description | In this study, mass spectrometry was used to explore the canine tear proteome. Tear samples were obtained from six healthy dogs, and one-dimensional sodium dodecyl sulphate polyacrylamide gel electrophoresis (1D SDS-PAGE) was used as a first step to separate intact proteins into 17 bands. Each fraction was then trypsin digested and analysed by matrix-assisted laser desorption/ionization time-of-flight tandem mass spectrometry (MALDI-TOF-MS/MS) to characterize the protein components in each fraction. In total, 125 tear proteins were identified, with MCA (Major Canine Allergen), Serum albumin, UPF0557 protein C10orf119 homolog, Collagen alpha-2(I) chain, Tyrosine -protein kinase Fer, Keratine type II cytoskeletal, Beta-crystallin B2, Interleukin-6 and Desmin occuring as the most confident ones with the highest scores. The results showed that the proteomic strategy used in this study was successful in the analysis of the dog tear proteome. To the best of our knowledge, this study is the first to report the comprehensive proteome profile of tears from healthy dogs by 1D SDS PAGE and MALDI-TOF. Data are available via ProteomeXchange with identifier PXD003124. |
format | Online Article Text |
id | pubmed-4689550 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-46895502015-12-31 Dog Tear Film Proteome In-Depth Analysis Winiarczyk, Mateusz Winiarczyk, Dagmara Banach, Tomasz Adaszek, Lukasz Madany, Jacek Mackiewicz, Jerzy Pietras-Ozga, Dorota Winiarczyk, Stanislaw PLoS One Research Article In this study, mass spectrometry was used to explore the canine tear proteome. Tear samples were obtained from six healthy dogs, and one-dimensional sodium dodecyl sulphate polyacrylamide gel electrophoresis (1D SDS-PAGE) was used as a first step to separate intact proteins into 17 bands. Each fraction was then trypsin digested and analysed by matrix-assisted laser desorption/ionization time-of-flight tandem mass spectrometry (MALDI-TOF-MS/MS) to characterize the protein components in each fraction. In total, 125 tear proteins were identified, with MCA (Major Canine Allergen), Serum albumin, UPF0557 protein C10orf119 homolog, Collagen alpha-2(I) chain, Tyrosine -protein kinase Fer, Keratine type II cytoskeletal, Beta-crystallin B2, Interleukin-6 and Desmin occuring as the most confident ones with the highest scores. The results showed that the proteomic strategy used in this study was successful in the analysis of the dog tear proteome. To the best of our knowledge, this study is the first to report the comprehensive proteome profile of tears from healthy dogs by 1D SDS PAGE and MALDI-TOF. Data are available via ProteomeXchange with identifier PXD003124. Public Library of Science 2015-12-23 /pmc/articles/PMC4689550/ /pubmed/26701646 http://dx.doi.org/10.1371/journal.pone.0144242 Text en © 2015 Winiarczyk et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Winiarczyk, Mateusz Winiarczyk, Dagmara Banach, Tomasz Adaszek, Lukasz Madany, Jacek Mackiewicz, Jerzy Pietras-Ozga, Dorota Winiarczyk, Stanislaw Dog Tear Film Proteome In-Depth Analysis |
title | Dog Tear Film Proteome In-Depth Analysis |
title_full | Dog Tear Film Proteome In-Depth Analysis |
title_fullStr | Dog Tear Film Proteome In-Depth Analysis |
title_full_unstemmed | Dog Tear Film Proteome In-Depth Analysis |
title_short | Dog Tear Film Proteome In-Depth Analysis |
title_sort | dog tear film proteome in-depth analysis |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4689550/ https://www.ncbi.nlm.nih.gov/pubmed/26701646 http://dx.doi.org/10.1371/journal.pone.0144242 |
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