Cargando…

A Combined Metabolomic and Proteomic Analysis of Gestational Diabetes Mellitus

The aim of this pilot study was to apply a novel combined metabolomic and proteomic approach in analysis of gestational diabetes mellitus. The investigation was performed with plasma samples derived from pregnant women with diagnosed gestational diabetes mellitus (n = 18) and a matched control group...

Descripción completa

Detalles Bibliográficos
Autores principales: Hajduk, Joanna, Klupczynska, Agnieszka, Dereziński, Paweł, Matysiak, Jan, Kokot, Piotr, Nowak, Dorota M., Gajęcka, Marzena, Nowak-Markwitz, Ewa, Kokot, Zenon J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4691080/
https://www.ncbi.nlm.nih.gov/pubmed/26694367
http://dx.doi.org/10.3390/ijms161226133
_version_ 1782407095181639680
author Hajduk, Joanna
Klupczynska, Agnieszka
Dereziński, Paweł
Matysiak, Jan
Kokot, Piotr
Nowak, Dorota M.
Gajęcka, Marzena
Nowak-Markwitz, Ewa
Kokot, Zenon J.
author_facet Hajduk, Joanna
Klupczynska, Agnieszka
Dereziński, Paweł
Matysiak, Jan
Kokot, Piotr
Nowak, Dorota M.
Gajęcka, Marzena
Nowak-Markwitz, Ewa
Kokot, Zenon J.
author_sort Hajduk, Joanna
collection PubMed
description The aim of this pilot study was to apply a novel combined metabolomic and proteomic approach in analysis of gestational diabetes mellitus. The investigation was performed with plasma samples derived from pregnant women with diagnosed gestational diabetes mellitus (n = 18) and a matched control group (n = 13). The mass spectrometry-based analyses allowed to determine 42 free amino acids and low molecular-weight peptide profiles. Different expressions of several peptides and altered amino acid profiles were observed in the analyzed groups. The combination of proteomic and metabolomic data allowed obtaining the model with a high discriminatory power, where amino acids ethanolamine, l-citrulline, l-asparagine, and peptide ions with m/z 1488.59; 4111.89 and 2913.15 had the highest contribution to the model. The sensitivity (94.44%) and specificity (84.62%), as well as the total group membership classification value (90.32%) calculated from the post hoc classification matrix of a joint model were the highest when compared with a single analysis of either amino acid levels or peptide ion intensities. The obtained results indicated a high potential of integration of proteomic and metabolomics analysis regardless the sample size. This promising approach together with clinical evaluation of the subjects can also be used in the study of other diseases.
format Online
Article
Text
id pubmed-4691080
institution National Center for Biotechnology Information
language English
publishDate 2015
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-46910802016-01-06 A Combined Metabolomic and Proteomic Analysis of Gestational Diabetes Mellitus Hajduk, Joanna Klupczynska, Agnieszka Dereziński, Paweł Matysiak, Jan Kokot, Piotr Nowak, Dorota M. Gajęcka, Marzena Nowak-Markwitz, Ewa Kokot, Zenon J. Int J Mol Sci Article The aim of this pilot study was to apply a novel combined metabolomic and proteomic approach in analysis of gestational diabetes mellitus. The investigation was performed with plasma samples derived from pregnant women with diagnosed gestational diabetes mellitus (n = 18) and a matched control group (n = 13). The mass spectrometry-based analyses allowed to determine 42 free amino acids and low molecular-weight peptide profiles. Different expressions of several peptides and altered amino acid profiles were observed in the analyzed groups. The combination of proteomic and metabolomic data allowed obtaining the model with a high discriminatory power, where amino acids ethanolamine, l-citrulline, l-asparagine, and peptide ions with m/z 1488.59; 4111.89 and 2913.15 had the highest contribution to the model. The sensitivity (94.44%) and specificity (84.62%), as well as the total group membership classification value (90.32%) calculated from the post hoc classification matrix of a joint model were the highest when compared with a single analysis of either amino acid levels or peptide ion intensities. The obtained results indicated a high potential of integration of proteomic and metabolomics analysis regardless the sample size. This promising approach together with clinical evaluation of the subjects can also be used in the study of other diseases. MDPI 2015-12-16 /pmc/articles/PMC4691080/ /pubmed/26694367 http://dx.doi.org/10.3390/ijms161226133 Text en © 2015 by the authors; licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons by Attribution (CC-BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Hajduk, Joanna
Klupczynska, Agnieszka
Dereziński, Paweł
Matysiak, Jan
Kokot, Piotr
Nowak, Dorota M.
Gajęcka, Marzena
Nowak-Markwitz, Ewa
Kokot, Zenon J.
A Combined Metabolomic and Proteomic Analysis of Gestational Diabetes Mellitus
title A Combined Metabolomic and Proteomic Analysis of Gestational Diabetes Mellitus
title_full A Combined Metabolomic and Proteomic Analysis of Gestational Diabetes Mellitus
title_fullStr A Combined Metabolomic and Proteomic Analysis of Gestational Diabetes Mellitus
title_full_unstemmed A Combined Metabolomic and Proteomic Analysis of Gestational Diabetes Mellitus
title_short A Combined Metabolomic and Proteomic Analysis of Gestational Diabetes Mellitus
title_sort combined metabolomic and proteomic analysis of gestational diabetes mellitus
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4691080/
https://www.ncbi.nlm.nih.gov/pubmed/26694367
http://dx.doi.org/10.3390/ijms161226133
work_keys_str_mv AT hajdukjoanna acombinedmetabolomicandproteomicanalysisofgestationaldiabetesmellitus
AT klupczynskaagnieszka acombinedmetabolomicandproteomicanalysisofgestationaldiabetesmellitus
AT derezinskipaweł acombinedmetabolomicandproteomicanalysisofgestationaldiabetesmellitus
AT matysiakjan acombinedmetabolomicandproteomicanalysisofgestationaldiabetesmellitus
AT kokotpiotr acombinedmetabolomicandproteomicanalysisofgestationaldiabetesmellitus
AT nowakdorotam acombinedmetabolomicandproteomicanalysisofgestationaldiabetesmellitus
AT gajeckamarzena acombinedmetabolomicandproteomicanalysisofgestationaldiabetesmellitus
AT nowakmarkwitzewa acombinedmetabolomicandproteomicanalysisofgestationaldiabetesmellitus
AT kokotzenonj acombinedmetabolomicandproteomicanalysisofgestationaldiabetesmellitus
AT hajdukjoanna combinedmetabolomicandproteomicanalysisofgestationaldiabetesmellitus
AT klupczynskaagnieszka combinedmetabolomicandproteomicanalysisofgestationaldiabetesmellitus
AT derezinskipaweł combinedmetabolomicandproteomicanalysisofgestationaldiabetesmellitus
AT matysiakjan combinedmetabolomicandproteomicanalysisofgestationaldiabetesmellitus
AT kokotpiotr combinedmetabolomicandproteomicanalysisofgestationaldiabetesmellitus
AT nowakdorotam combinedmetabolomicandproteomicanalysisofgestationaldiabetesmellitus
AT gajeckamarzena combinedmetabolomicandproteomicanalysisofgestationaldiabetesmellitus
AT nowakmarkwitzewa combinedmetabolomicandproteomicanalysisofgestationaldiabetesmellitus
AT kokotzenonj combinedmetabolomicandproteomicanalysisofgestationaldiabetesmellitus