Cargando…

Comparative Studies of 5S rDNA Profiles and Cyt b Sequences in two Onychostoma Species (Cyprinidae)

Onychostoma barbatulum and O. alticorpus, two primarily freshwater cyprinid fish, have similar morphological characters and partially overlapping ecological habitats. In order to explore the genetic differences between these two species, chromosomal characteristics and genetic variations were examin...

Descripción completa

Detalles Bibliográficos
Autores principales: Han, Chiao-Chuan, Yen, Tsair-Bor, Chen, Nian-Cih, Tseng, Mei-Chen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4691136/
https://www.ncbi.nlm.nih.gov/pubmed/26690426
http://dx.doi.org/10.3390/ijms161226193
_version_ 1782407108223827968
author Han, Chiao-Chuan
Yen, Tsair-Bor
Chen, Nian-Cih
Tseng, Mei-Chen
author_facet Han, Chiao-Chuan
Yen, Tsair-Bor
Chen, Nian-Cih
Tseng, Mei-Chen
author_sort Han, Chiao-Chuan
collection PubMed
description Onychostoma barbatulum and O. alticorpus, two primarily freshwater cyprinid fish, have similar morphological characters and partially overlapping ecological habitats. In order to explore the genetic differences between these two species, chromosomal characteristics and genetic variations were examined by fluorescence in situ hybridization (FISH) of 5S rDNA and cytochrome (Cyt) b gene analysis. Ten specimens of O. barbatulum and O. alticorpus were collected from the Nanzihsian Stream in southern Taiwan. FISH revealed that the 5S rDNA loci of O. barbatulum and O. alticorpus were found at a pericentromeric and subtelomeric position, respectively, in a pair of submetacentric chromosomes. Cyt b genes were amplified and sequenced from five individuals of each species. Intraspecific genetic distances ranged from 0.001–0.004 in O. barbatulum and from 0.001–0.006 in O. alticorpus. Genetic distances between these two species ranged from 0.132–0.142. The phylogenetic tree showed these two species are not sister species. In conclusion, FISH cytogenetic information and Cyt b gene analyses indicated that these two species have significantly different genetic characteristics; nevertheless, their morphological similarities may be due to environmental adaptation.
format Online
Article
Text
id pubmed-4691136
institution National Center for Biotechnology Information
language English
publishDate 2015
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-46911362016-01-06 Comparative Studies of 5S rDNA Profiles and Cyt b Sequences in two Onychostoma Species (Cyprinidae) Han, Chiao-Chuan Yen, Tsair-Bor Chen, Nian-Cih Tseng, Mei-Chen Int J Mol Sci Article Onychostoma barbatulum and O. alticorpus, two primarily freshwater cyprinid fish, have similar morphological characters and partially overlapping ecological habitats. In order to explore the genetic differences between these two species, chromosomal characteristics and genetic variations were examined by fluorescence in situ hybridization (FISH) of 5S rDNA and cytochrome (Cyt) b gene analysis. Ten specimens of O. barbatulum and O. alticorpus were collected from the Nanzihsian Stream in southern Taiwan. FISH revealed that the 5S rDNA loci of O. barbatulum and O. alticorpus were found at a pericentromeric and subtelomeric position, respectively, in a pair of submetacentric chromosomes. Cyt b genes were amplified and sequenced from five individuals of each species. Intraspecific genetic distances ranged from 0.001–0.004 in O. barbatulum and from 0.001–0.006 in O. alticorpus. Genetic distances between these two species ranged from 0.132–0.142. The phylogenetic tree showed these two species are not sister species. In conclusion, FISH cytogenetic information and Cyt b gene analyses indicated that these two species have significantly different genetic characteristics; nevertheless, their morphological similarities may be due to environmental adaptation. MDPI 2015-12-11 /pmc/articles/PMC4691136/ /pubmed/26690426 http://dx.doi.org/10.3390/ijms161226193 Text en © 2015 by the authors; licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons by Attribution (CC-BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Han, Chiao-Chuan
Yen, Tsair-Bor
Chen, Nian-Cih
Tseng, Mei-Chen
Comparative Studies of 5S rDNA Profiles and Cyt b Sequences in two Onychostoma Species (Cyprinidae)
title Comparative Studies of 5S rDNA Profiles and Cyt b Sequences in two Onychostoma Species (Cyprinidae)
title_full Comparative Studies of 5S rDNA Profiles and Cyt b Sequences in two Onychostoma Species (Cyprinidae)
title_fullStr Comparative Studies of 5S rDNA Profiles and Cyt b Sequences in two Onychostoma Species (Cyprinidae)
title_full_unstemmed Comparative Studies of 5S rDNA Profiles and Cyt b Sequences in two Onychostoma Species (Cyprinidae)
title_short Comparative Studies of 5S rDNA Profiles and Cyt b Sequences in two Onychostoma Species (Cyprinidae)
title_sort comparative studies of 5s rdna profiles and cyt b sequences in two onychostoma species (cyprinidae)
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4691136/
https://www.ncbi.nlm.nih.gov/pubmed/26690426
http://dx.doi.org/10.3390/ijms161226193
work_keys_str_mv AT hanchiaochuan comparativestudiesof5srdnaprofilesandcytbsequencesintwoonychostomaspeciescyprinidae
AT yentsairbor comparativestudiesof5srdnaprofilesandcytbsequencesintwoonychostomaspeciescyprinidae
AT chenniancih comparativestudiesof5srdnaprofilesandcytbsequencesintwoonychostomaspeciescyprinidae
AT tsengmeichen comparativestudiesof5srdnaprofilesandcytbsequencesintwoonychostomaspeciescyprinidae