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Biocuration with insufficient resources and fixed timelines
Biological curation, or biocuration, is often studied from the perspective of creating and maintaining databases that have the goal of mapping and tracking certain areas of biology. However, much biocuration is, in fact, dedicated to finite and time-limited projects in which insufficient resources d...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Oxford University Press
2015
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4691339/ https://www.ncbi.nlm.nih.gov/pubmed/26708987 http://dx.doi.org/10.1093/database/bav116 |
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author | Rodriguez-Esteban, Raul |
author_facet | Rodriguez-Esteban, Raul |
author_sort | Rodriguez-Esteban, Raul |
collection | PubMed |
description | Biological curation, or biocuration, is often studied from the perspective of creating and maintaining databases that have the goal of mapping and tracking certain areas of biology. However, much biocuration is, in fact, dedicated to finite and time-limited projects in which insufficient resources demand trade-offs. This typically more ephemeral type of curation is nonetheless of importance in biomedical research. Here, I propose a framework to understand such restricted curation projects from the point of view of return on curation (ROC), value, efficiency and productivity. Moreover, I suggest general strategies to optimize these curation efforts, such as the ‘multiple strategies’ approach, as well as a metric called overhead that can be used in the context of managing curation resources. |
format | Online Article Text |
id | pubmed-4691339 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-46913392015-12-28 Biocuration with insufficient resources and fixed timelines Rodriguez-Esteban, Raul Database (Oxford) Original Article Biological curation, or biocuration, is often studied from the perspective of creating and maintaining databases that have the goal of mapping and tracking certain areas of biology. However, much biocuration is, in fact, dedicated to finite and time-limited projects in which insufficient resources demand trade-offs. This typically more ephemeral type of curation is nonetheless of importance in biomedical research. Here, I propose a framework to understand such restricted curation projects from the point of view of return on curation (ROC), value, efficiency and productivity. Moreover, I suggest general strategies to optimize these curation efforts, such as the ‘multiple strategies’ approach, as well as a metric called overhead that can be used in the context of managing curation resources. Oxford University Press 2015-12-23 /pmc/articles/PMC4691339/ /pubmed/26708987 http://dx.doi.org/10.1093/database/bav116 Text en © The Author(s) 2015. Published by Oxford University Press. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Article Rodriguez-Esteban, Raul Biocuration with insufficient resources and fixed timelines |
title | Biocuration with insufficient resources and fixed timelines |
title_full | Biocuration with insufficient resources and fixed timelines |
title_fullStr | Biocuration with insufficient resources and fixed timelines |
title_full_unstemmed | Biocuration with insufficient resources and fixed timelines |
title_short | Biocuration with insufficient resources and fixed timelines |
title_sort | biocuration with insufficient resources and fixed timelines |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4691339/ https://www.ncbi.nlm.nih.gov/pubmed/26708987 http://dx.doi.org/10.1093/database/bav116 |
work_keys_str_mv | AT rodriguezestebanraul biocurationwithinsufficientresourcesandfixedtimelines |