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LymPHOS 2.0: an update of a phosphosite database of primary human T cells
LymPHOS is a web-oriented database containing peptide and protein sequences and spectrometric information on the phosphoproteome of primary human T-Lymphocytes. Current release 2.0 contains 15 566 phosphorylation sites from 8273 unique phosphopeptides and 4937 proteins, which correspond to a 45-fold...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4691341/ https://www.ncbi.nlm.nih.gov/pubmed/26708986 http://dx.doi.org/10.1093/database/bav115 |
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author | Nguyen, Tien Dung Vidal-Cortes, Oriol Gallardo, Oscar Abian, Joaquin Carrascal, Montserrat |
author_facet | Nguyen, Tien Dung Vidal-Cortes, Oriol Gallardo, Oscar Abian, Joaquin Carrascal, Montserrat |
author_sort | Nguyen, Tien Dung |
collection | PubMed |
description | LymPHOS is a web-oriented database containing peptide and protein sequences and spectrometric information on the phosphoproteome of primary human T-Lymphocytes. Current release 2.0 contains 15 566 phosphorylation sites from 8273 unique phosphopeptides and 4937 proteins, which correspond to a 45-fold increase over the original database description. It now includes quantitative data on phosphorylation changes after time-dependent treatment with activators of the TCR-mediated signal transduction pathway. Sequence data quality has also been improved with the use of multiple search engines for database searching. LymPHOS can be publicly accessed at http://www.lymphos.org. Database URL: http://www.lymphos.org. |
format | Online Article Text |
id | pubmed-4691341 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-46913412015-12-28 LymPHOS 2.0: an update of a phosphosite database of primary human T cells Nguyen, Tien Dung Vidal-Cortes, Oriol Gallardo, Oscar Abian, Joaquin Carrascal, Montserrat Database (Oxford) Database Update LymPHOS is a web-oriented database containing peptide and protein sequences and spectrometric information on the phosphoproteome of primary human T-Lymphocytes. Current release 2.0 contains 15 566 phosphorylation sites from 8273 unique phosphopeptides and 4937 proteins, which correspond to a 45-fold increase over the original database description. It now includes quantitative data on phosphorylation changes after time-dependent treatment with activators of the TCR-mediated signal transduction pathway. Sequence data quality has also been improved with the use of multiple search engines for database searching. LymPHOS can be publicly accessed at http://www.lymphos.org. Database URL: http://www.lymphos.org. Oxford University Press 2015-12-23 /pmc/articles/PMC4691341/ /pubmed/26708986 http://dx.doi.org/10.1093/database/bav115 Text en © The Author(s) 2015. Published by Oxford University Press. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Database Update Nguyen, Tien Dung Vidal-Cortes, Oriol Gallardo, Oscar Abian, Joaquin Carrascal, Montserrat LymPHOS 2.0: an update of a phosphosite database of primary human T cells |
title | LymPHOS 2.0: an update of a phosphosite database of primary human T cells |
title_full | LymPHOS 2.0: an update of a phosphosite database of primary human T cells |
title_fullStr | LymPHOS 2.0: an update of a phosphosite database of primary human T cells |
title_full_unstemmed | LymPHOS 2.0: an update of a phosphosite database of primary human T cells |
title_short | LymPHOS 2.0: an update of a phosphosite database of primary human T cells |
title_sort | lymphos 2.0: an update of a phosphosite database of primary human t cells |
topic | Database Update |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4691341/ https://www.ncbi.nlm.nih.gov/pubmed/26708986 http://dx.doi.org/10.1093/database/bav115 |
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