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Circular RNAs in monkey muscle: age-dependent changes

Circular RNAs (circRNAs) have been identified in numerous species, including human, mouse, nematode, and coelacanth. They are believed to function as regulators of gene expression at least in part by sponging microRNAs. Here, we describe the identification of circRNAs in monkey (Rhesus macaque) skel...

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Autores principales: Abdelmohsen, Kotb, Panda, Amaresh C., De, Supriyo, Grammatikakis, Ioannis, Kim, Jiyoung, Ding, Jun, Noh, Ji Heon, Kim, Kyoung Mi, Mattison, Julie A., de Cabo, Rafael, Gorospe, Myriam
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Impact Journals LLC 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4694061/
https://www.ncbi.nlm.nih.gov/pubmed/26546448
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author Abdelmohsen, Kotb
Panda, Amaresh C.
De, Supriyo
Grammatikakis, Ioannis
Kim, Jiyoung
Ding, Jun
Noh, Ji Heon
Kim, Kyoung Mi
Mattison, Julie A.
de Cabo, Rafael
Gorospe, Myriam
author_facet Abdelmohsen, Kotb
Panda, Amaresh C.
De, Supriyo
Grammatikakis, Ioannis
Kim, Jiyoung
Ding, Jun
Noh, Ji Heon
Kim, Kyoung Mi
Mattison, Julie A.
de Cabo, Rafael
Gorospe, Myriam
author_sort Abdelmohsen, Kotb
collection PubMed
description Circular RNAs (circRNAs) have been identified in numerous species, including human, mouse, nematode, and coelacanth. They are believed to function as regulators of gene expression at least in part by sponging microRNAs. Here, we describe the identification of circRNAs in monkey (Rhesus macaque) skeletal muscle. RNA sequencing analysis was employed to identify and annotate ∼12,000 circRNAs, including numerous circular intronic RNAs (ciRNAs), from skeletal muscle of monkeys of a range of ages. Reverse transcription followed by real-time quantitative (q)PCR analysis verified the presence of these circRNAs, including the existence of several highly abundant circRNAs, and the differential abundance of a subset of circRNAs as a function of age. Taken together, our study has documented systematically circRNAs expressed in skeletal muscle and has identified circRNAs differentially abundant with advancing muscle age. We propose that some of these circRNAs might influence muscle function.
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spelling pubmed-46940612016-01-07 Circular RNAs in monkey muscle: age-dependent changes Abdelmohsen, Kotb Panda, Amaresh C. De, Supriyo Grammatikakis, Ioannis Kim, Jiyoung Ding, Jun Noh, Ji Heon Kim, Kyoung Mi Mattison, Julie A. de Cabo, Rafael Gorospe, Myriam Aging (Albany NY) Research Paper Circular RNAs (circRNAs) have been identified in numerous species, including human, mouse, nematode, and coelacanth. They are believed to function as regulators of gene expression at least in part by sponging microRNAs. Here, we describe the identification of circRNAs in monkey (Rhesus macaque) skeletal muscle. RNA sequencing analysis was employed to identify and annotate ∼12,000 circRNAs, including numerous circular intronic RNAs (ciRNAs), from skeletal muscle of monkeys of a range of ages. Reverse transcription followed by real-time quantitative (q)PCR analysis verified the presence of these circRNAs, including the existence of several highly abundant circRNAs, and the differential abundance of a subset of circRNAs as a function of age. Taken together, our study has documented systematically circRNAs expressed in skeletal muscle and has identified circRNAs differentially abundant with advancing muscle age. We propose that some of these circRNAs might influence muscle function. Impact Journals LLC 2015-11-04 /pmc/articles/PMC4694061/ /pubmed/26546448 Text en Copyright: © 2015 Abdelmohsen et al. http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Paper
Abdelmohsen, Kotb
Panda, Amaresh C.
De, Supriyo
Grammatikakis, Ioannis
Kim, Jiyoung
Ding, Jun
Noh, Ji Heon
Kim, Kyoung Mi
Mattison, Julie A.
de Cabo, Rafael
Gorospe, Myriam
Circular RNAs in monkey muscle: age-dependent changes
title Circular RNAs in monkey muscle: age-dependent changes
title_full Circular RNAs in monkey muscle: age-dependent changes
title_fullStr Circular RNAs in monkey muscle: age-dependent changes
title_full_unstemmed Circular RNAs in monkey muscle: age-dependent changes
title_short Circular RNAs in monkey muscle: age-dependent changes
title_sort circular rnas in monkey muscle: age-dependent changes
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4694061/
https://www.ncbi.nlm.nih.gov/pubmed/26546448
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