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Circular RNAs in monkey muscle: age-dependent changes
Circular RNAs (circRNAs) have been identified in numerous species, including human, mouse, nematode, and coelacanth. They are believed to function as regulators of gene expression at least in part by sponging microRNAs. Here, we describe the identification of circRNAs in monkey (Rhesus macaque) skel...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Impact Journals LLC
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4694061/ https://www.ncbi.nlm.nih.gov/pubmed/26546448 |
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author | Abdelmohsen, Kotb Panda, Amaresh C. De, Supriyo Grammatikakis, Ioannis Kim, Jiyoung Ding, Jun Noh, Ji Heon Kim, Kyoung Mi Mattison, Julie A. de Cabo, Rafael Gorospe, Myriam |
author_facet | Abdelmohsen, Kotb Panda, Amaresh C. De, Supriyo Grammatikakis, Ioannis Kim, Jiyoung Ding, Jun Noh, Ji Heon Kim, Kyoung Mi Mattison, Julie A. de Cabo, Rafael Gorospe, Myriam |
author_sort | Abdelmohsen, Kotb |
collection | PubMed |
description | Circular RNAs (circRNAs) have been identified in numerous species, including human, mouse, nematode, and coelacanth. They are believed to function as regulators of gene expression at least in part by sponging microRNAs. Here, we describe the identification of circRNAs in monkey (Rhesus macaque) skeletal muscle. RNA sequencing analysis was employed to identify and annotate ∼12,000 circRNAs, including numerous circular intronic RNAs (ciRNAs), from skeletal muscle of monkeys of a range of ages. Reverse transcription followed by real-time quantitative (q)PCR analysis verified the presence of these circRNAs, including the existence of several highly abundant circRNAs, and the differential abundance of a subset of circRNAs as a function of age. Taken together, our study has documented systematically circRNAs expressed in skeletal muscle and has identified circRNAs differentially abundant with advancing muscle age. We propose that some of these circRNAs might influence muscle function. |
format | Online Article Text |
id | pubmed-4694061 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Impact Journals LLC |
record_format | MEDLINE/PubMed |
spelling | pubmed-46940612016-01-07 Circular RNAs in monkey muscle: age-dependent changes Abdelmohsen, Kotb Panda, Amaresh C. De, Supriyo Grammatikakis, Ioannis Kim, Jiyoung Ding, Jun Noh, Ji Heon Kim, Kyoung Mi Mattison, Julie A. de Cabo, Rafael Gorospe, Myriam Aging (Albany NY) Research Paper Circular RNAs (circRNAs) have been identified in numerous species, including human, mouse, nematode, and coelacanth. They are believed to function as regulators of gene expression at least in part by sponging microRNAs. Here, we describe the identification of circRNAs in monkey (Rhesus macaque) skeletal muscle. RNA sequencing analysis was employed to identify and annotate ∼12,000 circRNAs, including numerous circular intronic RNAs (ciRNAs), from skeletal muscle of monkeys of a range of ages. Reverse transcription followed by real-time quantitative (q)PCR analysis verified the presence of these circRNAs, including the existence of several highly abundant circRNAs, and the differential abundance of a subset of circRNAs as a function of age. Taken together, our study has documented systematically circRNAs expressed in skeletal muscle and has identified circRNAs differentially abundant with advancing muscle age. We propose that some of these circRNAs might influence muscle function. Impact Journals LLC 2015-11-04 /pmc/articles/PMC4694061/ /pubmed/26546448 Text en Copyright: © 2015 Abdelmohsen et al. http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Paper Abdelmohsen, Kotb Panda, Amaresh C. De, Supriyo Grammatikakis, Ioannis Kim, Jiyoung Ding, Jun Noh, Ji Heon Kim, Kyoung Mi Mattison, Julie A. de Cabo, Rafael Gorospe, Myriam Circular RNAs in monkey muscle: age-dependent changes |
title | Circular RNAs in monkey muscle: age-dependent changes |
title_full | Circular RNAs in monkey muscle: age-dependent changes |
title_fullStr | Circular RNAs in monkey muscle: age-dependent changes |
title_full_unstemmed | Circular RNAs in monkey muscle: age-dependent changes |
title_short | Circular RNAs in monkey muscle: age-dependent changes |
title_sort | circular rnas in monkey muscle: age-dependent changes |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4694061/ https://www.ncbi.nlm.nih.gov/pubmed/26546448 |
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