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“Cancer 2015”: A Prospective, Population-Based Cancer Cohort—Phase 1: Feasibility of Genomics-Guided Precision Medicine in the Clinic

“Cancer 2015” is a longitudinal and prospective cohort. It is a phased study whose aim was to pilot recruiting 1000 patients during phase 1 to establish the feasibility of providing a population-based genomics cohort. Newly diagnosed adult patients with solid cancers, with residual tumour material f...

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Autores principales: Parisot, John P., Thorne, Heather, Fellowes, Andrew, Doig, Ken, Lucas, Mark, McNeil, John J., Doble, Brett, Dobrovic, Alexander, John, Thomas, James, Paul A., Lipton, Lara, Ashley, David, Hayes, Theresa, McMurrick, Paul, Richardson, Gary, Lorgelly, Paula, Fox, Stephen B., Thomas, David M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4695860/
https://www.ncbi.nlm.nih.gov/pubmed/26529019
http://dx.doi.org/10.3390/jpm5040354
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author Parisot, John P.
Thorne, Heather
Fellowes, Andrew
Doig, Ken
Lucas, Mark
McNeil, John J.
Doble, Brett
Dobrovic, Alexander
John, Thomas
James, Paul A.
Lipton, Lara
Ashley, David
Hayes, Theresa
McMurrick, Paul
Richardson, Gary
Lorgelly, Paula
Fox, Stephen B.
Thomas, David M.
author_facet Parisot, John P.
Thorne, Heather
Fellowes, Andrew
Doig, Ken
Lucas, Mark
McNeil, John J.
Doble, Brett
Dobrovic, Alexander
John, Thomas
James, Paul A.
Lipton, Lara
Ashley, David
Hayes, Theresa
McMurrick, Paul
Richardson, Gary
Lorgelly, Paula
Fox, Stephen B.
Thomas, David M.
author_sort Parisot, John P.
collection PubMed
description “Cancer 2015” is a longitudinal and prospective cohort. It is a phased study whose aim was to pilot recruiting 1000 patients during phase 1 to establish the feasibility of providing a population-based genomics cohort. Newly diagnosed adult patients with solid cancers, with residual tumour material for molecular genomics testing, were recruited into the cohort for the collection of a dataset containing clinical, molecular pathology, health resource use and outcomes data. 1685 patients have been recruited over almost 3 years from five hospitals. Thirty-two percent are aged between 61–70 years old, with a median age of 63 years. Diagnostic tumour samples were obtained for 90% of these patients for multiple parallel sequencing. Patients identified with somatic mutations of potentially “actionable” variants represented almost 10% of those tumours sequenced, while 42% of the cohort had no mutations identified. These genomic data were annotated with information such as cancer site, stage, morphology, treatment and patient outcomes and health resource use and cost. This cohort has delivered its main objective of establishing an upscalable genomics cohort within a clinical setting and in phase 2 aims to develop a protocol for how genomics testing can be used in real-time clinical decision-making, providing evidence on the value of precision medicine to clinical practice.
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spelling pubmed-46958602016-01-19 “Cancer 2015”: A Prospective, Population-Based Cancer Cohort—Phase 1: Feasibility of Genomics-Guided Precision Medicine in the Clinic Parisot, John P. Thorne, Heather Fellowes, Andrew Doig, Ken Lucas, Mark McNeil, John J. Doble, Brett Dobrovic, Alexander John, Thomas James, Paul A. Lipton, Lara Ashley, David Hayes, Theresa McMurrick, Paul Richardson, Gary Lorgelly, Paula Fox, Stephen B. Thomas, David M. J Pers Med Article “Cancer 2015” is a longitudinal and prospective cohort. It is a phased study whose aim was to pilot recruiting 1000 patients during phase 1 to establish the feasibility of providing a population-based genomics cohort. Newly diagnosed adult patients with solid cancers, with residual tumour material for molecular genomics testing, were recruited into the cohort for the collection of a dataset containing clinical, molecular pathology, health resource use and outcomes data. 1685 patients have been recruited over almost 3 years from five hospitals. Thirty-two percent are aged between 61–70 years old, with a median age of 63 years. Diagnostic tumour samples were obtained for 90% of these patients for multiple parallel sequencing. Patients identified with somatic mutations of potentially “actionable” variants represented almost 10% of those tumours sequenced, while 42% of the cohort had no mutations identified. These genomic data were annotated with information such as cancer site, stage, morphology, treatment and patient outcomes and health resource use and cost. This cohort has delivered its main objective of establishing an upscalable genomics cohort within a clinical setting and in phase 2 aims to develop a protocol for how genomics testing can be used in real-time clinical decision-making, providing evidence on the value of precision medicine to clinical practice. MDPI 2015-10-29 /pmc/articles/PMC4695860/ /pubmed/26529019 http://dx.doi.org/10.3390/jpm5040354 Text en © 2015 by the authors; licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Parisot, John P.
Thorne, Heather
Fellowes, Andrew
Doig, Ken
Lucas, Mark
McNeil, John J.
Doble, Brett
Dobrovic, Alexander
John, Thomas
James, Paul A.
Lipton, Lara
Ashley, David
Hayes, Theresa
McMurrick, Paul
Richardson, Gary
Lorgelly, Paula
Fox, Stephen B.
Thomas, David M.
“Cancer 2015”: A Prospective, Population-Based Cancer Cohort—Phase 1: Feasibility of Genomics-Guided Precision Medicine in the Clinic
title “Cancer 2015”: A Prospective, Population-Based Cancer Cohort—Phase 1: Feasibility of Genomics-Guided Precision Medicine in the Clinic
title_full “Cancer 2015”: A Prospective, Population-Based Cancer Cohort—Phase 1: Feasibility of Genomics-Guided Precision Medicine in the Clinic
title_fullStr “Cancer 2015”: A Prospective, Population-Based Cancer Cohort—Phase 1: Feasibility of Genomics-Guided Precision Medicine in the Clinic
title_full_unstemmed “Cancer 2015”: A Prospective, Population-Based Cancer Cohort—Phase 1: Feasibility of Genomics-Guided Precision Medicine in the Clinic
title_short “Cancer 2015”: A Prospective, Population-Based Cancer Cohort—Phase 1: Feasibility of Genomics-Guided Precision Medicine in the Clinic
title_sort “cancer 2015”: a prospective, population-based cancer cohort—phase 1: feasibility of genomics-guided precision medicine in the clinic
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4695860/
https://www.ncbi.nlm.nih.gov/pubmed/26529019
http://dx.doi.org/10.3390/jpm5040354
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