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Cellular O-Glycome Reporter/Amplification to Explore O-Glycans of Living Cells
Protein O-glycosylation plays key roles in many biological processes, but the repertoire of O-glycans synthesized by cells is difficult to determine. Here we describe a new approach termed Cellular O-Glycome Reporter/Amplification (CORA), a sensitive method to amplify and profile mucin-type O-glycan...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4697867/ https://www.ncbi.nlm.nih.gov/pubmed/26619014 http://dx.doi.org/10.1038/nmeth.3675 |
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author | Kudelka, Matthew R. Antonopoulos, Aristotelis Wang, Yingchun Duong, Duc M. Song, Xuezheng Seyfried, Nicholas T. Dell, Anne Haslam, Stuart M. Cummings, Richard D. Ju, Tongzhong |
author_facet | Kudelka, Matthew R. Antonopoulos, Aristotelis Wang, Yingchun Duong, Duc M. Song, Xuezheng Seyfried, Nicholas T. Dell, Anne Haslam, Stuart M. Cummings, Richard D. Ju, Tongzhong |
author_sort | Kudelka, Matthew R. |
collection | PubMed |
description | Protein O-glycosylation plays key roles in many biological processes, but the repertoire of O-glycans synthesized by cells is difficult to determine. Here we describe a new approach termed Cellular O-Glycome Reporter/Amplification (CORA), a sensitive method to amplify and profile mucin-type O-glycans synthesized by living cells. Cells incubated with peracetylated benzyl-α-N-acetylgalactosamine (GalNAc-α-Benzyl) convert it to a large variety of modified O-glycan derivatives that are secreted from cells, allowing easy purification for analysis by HPLC and mass spectrometry (MS). CORA results in ~100–1000-fold increase in sensitivity over conventional O-glycan analyses and identifies a more complex repertoire of O-glycans in more than a dozen cell types from Homo sapiens and Mus musculus. Furthermore, CORA coupled with computational modeling allows predictions on the diversity of the human O-glycome and offers new opportunities to identify novel glycan biomarkers for human diseases. |
format | Online Article Text |
id | pubmed-4697867 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
record_format | MEDLINE/PubMed |
spelling | pubmed-46978672016-05-30 Cellular O-Glycome Reporter/Amplification to Explore O-Glycans of Living Cells Kudelka, Matthew R. Antonopoulos, Aristotelis Wang, Yingchun Duong, Duc M. Song, Xuezheng Seyfried, Nicholas T. Dell, Anne Haslam, Stuart M. Cummings, Richard D. Ju, Tongzhong Nat Methods Article Protein O-glycosylation plays key roles in many biological processes, but the repertoire of O-glycans synthesized by cells is difficult to determine. Here we describe a new approach termed Cellular O-Glycome Reporter/Amplification (CORA), a sensitive method to amplify and profile mucin-type O-glycans synthesized by living cells. Cells incubated with peracetylated benzyl-α-N-acetylgalactosamine (GalNAc-α-Benzyl) convert it to a large variety of modified O-glycan derivatives that are secreted from cells, allowing easy purification for analysis by HPLC and mass spectrometry (MS). CORA results in ~100–1000-fold increase in sensitivity over conventional O-glycan analyses and identifies a more complex repertoire of O-glycans in more than a dozen cell types from Homo sapiens and Mus musculus. Furthermore, CORA coupled with computational modeling allows predictions on the diversity of the human O-glycome and offers new opportunities to identify novel glycan biomarkers for human diseases. 2015-11-30 2016-01 /pmc/articles/PMC4697867/ /pubmed/26619014 http://dx.doi.org/10.1038/nmeth.3675 Text en Users may view, print, copy, and download text and data-mine the content in such documents, for the purposes of academic research, subject always to the full Conditions of use:http://www.nature.com/authors/editorial_policies/license.html#terms |
spellingShingle | Article Kudelka, Matthew R. Antonopoulos, Aristotelis Wang, Yingchun Duong, Duc M. Song, Xuezheng Seyfried, Nicholas T. Dell, Anne Haslam, Stuart M. Cummings, Richard D. Ju, Tongzhong Cellular O-Glycome Reporter/Amplification to Explore O-Glycans of Living Cells |
title | Cellular O-Glycome Reporter/Amplification to Explore O-Glycans of Living Cells |
title_full | Cellular O-Glycome Reporter/Amplification to Explore O-Glycans of Living Cells |
title_fullStr | Cellular O-Glycome Reporter/Amplification to Explore O-Glycans of Living Cells |
title_full_unstemmed | Cellular O-Glycome Reporter/Amplification to Explore O-Glycans of Living Cells |
title_short | Cellular O-Glycome Reporter/Amplification to Explore O-Glycans of Living Cells |
title_sort | cellular o-glycome reporter/amplification to explore o-glycans of living cells |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4697867/ https://www.ncbi.nlm.nih.gov/pubmed/26619014 http://dx.doi.org/10.1038/nmeth.3675 |
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