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Cellular O-Glycome Reporter/Amplification to Explore O-Glycans of Living Cells

Protein O-glycosylation plays key roles in many biological processes, but the repertoire of O-glycans synthesized by cells is difficult to determine. Here we describe a new approach termed Cellular O-Glycome Reporter/Amplification (CORA), a sensitive method to amplify and profile mucin-type O-glycan...

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Autores principales: Kudelka, Matthew R., Antonopoulos, Aristotelis, Wang, Yingchun, Duong, Duc M., Song, Xuezheng, Seyfried, Nicholas T., Dell, Anne, Haslam, Stuart M., Cummings, Richard D., Ju, Tongzhong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4697867/
https://www.ncbi.nlm.nih.gov/pubmed/26619014
http://dx.doi.org/10.1038/nmeth.3675
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author Kudelka, Matthew R.
Antonopoulos, Aristotelis
Wang, Yingchun
Duong, Duc M.
Song, Xuezheng
Seyfried, Nicholas T.
Dell, Anne
Haslam, Stuart M.
Cummings, Richard D.
Ju, Tongzhong
author_facet Kudelka, Matthew R.
Antonopoulos, Aristotelis
Wang, Yingchun
Duong, Duc M.
Song, Xuezheng
Seyfried, Nicholas T.
Dell, Anne
Haslam, Stuart M.
Cummings, Richard D.
Ju, Tongzhong
author_sort Kudelka, Matthew R.
collection PubMed
description Protein O-glycosylation plays key roles in many biological processes, but the repertoire of O-glycans synthesized by cells is difficult to determine. Here we describe a new approach termed Cellular O-Glycome Reporter/Amplification (CORA), a sensitive method to amplify and profile mucin-type O-glycans synthesized by living cells. Cells incubated with peracetylated benzyl-α-N-acetylgalactosamine (GalNAc-α-Benzyl) convert it to a large variety of modified O-glycan derivatives that are secreted from cells, allowing easy purification for analysis by HPLC and mass spectrometry (MS). CORA results in ~100–1000-fold increase in sensitivity over conventional O-glycan analyses and identifies a more complex repertoire of O-glycans in more than a dozen cell types from Homo sapiens and Mus musculus. Furthermore, CORA coupled with computational modeling allows predictions on the diversity of the human O-glycome and offers new opportunities to identify novel glycan biomarkers for human diseases.
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spelling pubmed-46978672016-05-30 Cellular O-Glycome Reporter/Amplification to Explore O-Glycans of Living Cells Kudelka, Matthew R. Antonopoulos, Aristotelis Wang, Yingchun Duong, Duc M. Song, Xuezheng Seyfried, Nicholas T. Dell, Anne Haslam, Stuart M. Cummings, Richard D. Ju, Tongzhong Nat Methods Article Protein O-glycosylation plays key roles in many biological processes, but the repertoire of O-glycans synthesized by cells is difficult to determine. Here we describe a new approach termed Cellular O-Glycome Reporter/Amplification (CORA), a sensitive method to amplify and profile mucin-type O-glycans synthesized by living cells. Cells incubated with peracetylated benzyl-α-N-acetylgalactosamine (GalNAc-α-Benzyl) convert it to a large variety of modified O-glycan derivatives that are secreted from cells, allowing easy purification for analysis by HPLC and mass spectrometry (MS). CORA results in ~100–1000-fold increase in sensitivity over conventional O-glycan analyses and identifies a more complex repertoire of O-glycans in more than a dozen cell types from Homo sapiens and Mus musculus. Furthermore, CORA coupled with computational modeling allows predictions on the diversity of the human O-glycome and offers new opportunities to identify novel glycan biomarkers for human diseases. 2015-11-30 2016-01 /pmc/articles/PMC4697867/ /pubmed/26619014 http://dx.doi.org/10.1038/nmeth.3675 Text en Users may view, print, copy, and download text and data-mine the content in such documents, for the purposes of academic research, subject always to the full Conditions of use:http://www.nature.com/authors/editorial_policies/license.html#terms
spellingShingle Article
Kudelka, Matthew R.
Antonopoulos, Aristotelis
Wang, Yingchun
Duong, Duc M.
Song, Xuezheng
Seyfried, Nicholas T.
Dell, Anne
Haslam, Stuart M.
Cummings, Richard D.
Ju, Tongzhong
Cellular O-Glycome Reporter/Amplification to Explore O-Glycans of Living Cells
title Cellular O-Glycome Reporter/Amplification to Explore O-Glycans of Living Cells
title_full Cellular O-Glycome Reporter/Amplification to Explore O-Glycans of Living Cells
title_fullStr Cellular O-Glycome Reporter/Amplification to Explore O-Glycans of Living Cells
title_full_unstemmed Cellular O-Glycome Reporter/Amplification to Explore O-Glycans of Living Cells
title_short Cellular O-Glycome Reporter/Amplification to Explore O-Glycans of Living Cells
title_sort cellular o-glycome reporter/amplification to explore o-glycans of living cells
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4697867/
https://www.ncbi.nlm.nih.gov/pubmed/26619014
http://dx.doi.org/10.1038/nmeth.3675
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