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Dynamics of Viral Abundance and Diversity in a Sphagnum-Dominated Peatland: Temporal Fluctuations Prevail Over Habitat

Viruses impact microbial activity and carbon cycling in various environments, but their diversity and ecological importance in Sphagnum-peatlands are unknown. Abundances of viral particles and prokaryotes were monitored bi-monthly at a fen and a bog at two different layers of the peat surface. Viral...

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Autores principales: Ballaud, Flore, Dufresne, Alexis, Francez, André-Jean, Colombet, Jonathan, Sime-Ngando, Télesphore, Quaiser, Achim
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4701944/
https://www.ncbi.nlm.nih.gov/pubmed/26779149
http://dx.doi.org/10.3389/fmicb.2015.01494
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author Ballaud, Flore
Dufresne, Alexis
Francez, André-Jean
Colombet, Jonathan
Sime-Ngando, Télesphore
Quaiser, Achim
author_facet Ballaud, Flore
Dufresne, Alexis
Francez, André-Jean
Colombet, Jonathan
Sime-Ngando, Télesphore
Quaiser, Achim
author_sort Ballaud, Flore
collection PubMed
description Viruses impact microbial activity and carbon cycling in various environments, but their diversity and ecological importance in Sphagnum-peatlands are unknown. Abundances of viral particles and prokaryotes were monitored bi-monthly at a fen and a bog at two different layers of the peat surface. Viral particle abundance ranged from 1.7 x 10(6) to 5.6 x 10(8) particles mL(-1), and did not differ between fen and bog but showed seasonal fluctuations. These fluctuations were positively correlated with prokaryote abundance and dissolved organic carbon, and negatively correlated with water-table height and dissolved oxygen. Using shotgun metagenomics we observed a shift in viral diversity between winter/spring and summer/autumn, indicating a seasonal succession of viral communities, mainly driven by weather-related environmental changes. Based on the seasonal asynchrony between viral and microbial diversity, we hypothesize a seasonal shift in the active microbial communities associated with a shift from lysogenic to lytic lifestyles. Our results suggest that temporal variations of environmental conditions rather than current habitat differences control the dynamics of virus-host interactions in Sphagnum-dominated peatlands.
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spelling pubmed-47019442016-01-15 Dynamics of Viral Abundance and Diversity in a Sphagnum-Dominated Peatland: Temporal Fluctuations Prevail Over Habitat Ballaud, Flore Dufresne, Alexis Francez, André-Jean Colombet, Jonathan Sime-Ngando, Télesphore Quaiser, Achim Front Microbiol Microbiology Viruses impact microbial activity and carbon cycling in various environments, but their diversity and ecological importance in Sphagnum-peatlands are unknown. Abundances of viral particles and prokaryotes were monitored bi-monthly at a fen and a bog at two different layers of the peat surface. Viral particle abundance ranged from 1.7 x 10(6) to 5.6 x 10(8) particles mL(-1), and did not differ between fen and bog but showed seasonal fluctuations. These fluctuations were positively correlated with prokaryote abundance and dissolved organic carbon, and negatively correlated with water-table height and dissolved oxygen. Using shotgun metagenomics we observed a shift in viral diversity between winter/spring and summer/autumn, indicating a seasonal succession of viral communities, mainly driven by weather-related environmental changes. Based on the seasonal asynchrony between viral and microbial diversity, we hypothesize a seasonal shift in the active microbial communities associated with a shift from lysogenic to lytic lifestyles. Our results suggest that temporal variations of environmental conditions rather than current habitat differences control the dynamics of virus-host interactions in Sphagnum-dominated peatlands. Frontiers Media S.A. 2016-01-06 /pmc/articles/PMC4701944/ /pubmed/26779149 http://dx.doi.org/10.3389/fmicb.2015.01494 Text en Copyright © 2016 Ballaud, Dufresne, Francez, Colombet, Sime-Ngando and Quaiser. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
Ballaud, Flore
Dufresne, Alexis
Francez, André-Jean
Colombet, Jonathan
Sime-Ngando, Télesphore
Quaiser, Achim
Dynamics of Viral Abundance and Diversity in a Sphagnum-Dominated Peatland: Temporal Fluctuations Prevail Over Habitat
title Dynamics of Viral Abundance and Diversity in a Sphagnum-Dominated Peatland: Temporal Fluctuations Prevail Over Habitat
title_full Dynamics of Viral Abundance and Diversity in a Sphagnum-Dominated Peatland: Temporal Fluctuations Prevail Over Habitat
title_fullStr Dynamics of Viral Abundance and Diversity in a Sphagnum-Dominated Peatland: Temporal Fluctuations Prevail Over Habitat
title_full_unstemmed Dynamics of Viral Abundance and Diversity in a Sphagnum-Dominated Peatland: Temporal Fluctuations Prevail Over Habitat
title_short Dynamics of Viral Abundance and Diversity in a Sphagnum-Dominated Peatland: Temporal Fluctuations Prevail Over Habitat
title_sort dynamics of viral abundance and diversity in a sphagnum-dominated peatland: temporal fluctuations prevail over habitat
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4701944/
https://www.ncbi.nlm.nih.gov/pubmed/26779149
http://dx.doi.org/10.3389/fmicb.2015.01494
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