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FLOR-ID: an interactive database of flowering-time gene networks in Arabidopsis thaliana

Flowering is a hot topic in Plant Biology and important progress has been made in Arabidopsis thaliana toward unraveling the genetic networks involved. The increasing complexity and the explosion of literature however require development of new tools for information management and update. We therefo...

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Detalles Bibliográficos
Autores principales: Bouché, Frédéric, Lobet, Guillaume, Tocquin, Pierre, Périlleux, Claire
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4702789/
https://www.ncbi.nlm.nih.gov/pubmed/26476447
http://dx.doi.org/10.1093/nar/gkv1054
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author Bouché, Frédéric
Lobet, Guillaume
Tocquin, Pierre
Périlleux, Claire
author_facet Bouché, Frédéric
Lobet, Guillaume
Tocquin, Pierre
Périlleux, Claire
author_sort Bouché, Frédéric
collection PubMed
description Flowering is a hot topic in Plant Biology and important progress has been made in Arabidopsis thaliana toward unraveling the genetic networks involved. The increasing complexity and the explosion of literature however require development of new tools for information management and update. We therefore created an evolutive and interactive database of flowering time genes, named FLOR-ID (Flowering-Interactive Database), which is freely accessible at http://www.flor-id.org. The hand-curated database contains information on 306 genes and links to 1595 publications gathering the work of >4500 authors. Gene/protein functions and interactions within the flowering pathways were inferred from the analysis of related publications, included in the database and translated into interactive manually drawn snapshots.
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spelling pubmed-47027892016-01-07 FLOR-ID: an interactive database of flowering-time gene networks in Arabidopsis thaliana Bouché, Frédéric Lobet, Guillaume Tocquin, Pierre Périlleux, Claire Nucleic Acids Res Database Issue Flowering is a hot topic in Plant Biology and important progress has been made in Arabidopsis thaliana toward unraveling the genetic networks involved. The increasing complexity and the explosion of literature however require development of new tools for information management and update. We therefore created an evolutive and interactive database of flowering time genes, named FLOR-ID (Flowering-Interactive Database), which is freely accessible at http://www.flor-id.org. The hand-curated database contains information on 306 genes and links to 1595 publications gathering the work of >4500 authors. Gene/protein functions and interactions within the flowering pathways were inferred from the analysis of related publications, included in the database and translated into interactive manually drawn snapshots. Oxford University Press 2016-01-04 2015-10-17 /pmc/articles/PMC4702789/ /pubmed/26476447 http://dx.doi.org/10.1093/nar/gkv1054 Text en © The Author(s) 2015. Published by Oxford University Press on behalf of Nucleic Acids Research. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Database Issue
Bouché, Frédéric
Lobet, Guillaume
Tocquin, Pierre
Périlleux, Claire
FLOR-ID: an interactive database of flowering-time gene networks in Arabidopsis thaliana
title FLOR-ID: an interactive database of flowering-time gene networks in Arabidopsis thaliana
title_full FLOR-ID: an interactive database of flowering-time gene networks in Arabidopsis thaliana
title_fullStr FLOR-ID: an interactive database of flowering-time gene networks in Arabidopsis thaliana
title_full_unstemmed FLOR-ID: an interactive database of flowering-time gene networks in Arabidopsis thaliana
title_short FLOR-ID: an interactive database of flowering-time gene networks in Arabidopsis thaliana
title_sort flor-id: an interactive database of flowering-time gene networks in arabidopsis thaliana
topic Database Issue
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4702789/
https://www.ncbi.nlm.nih.gov/pubmed/26476447
http://dx.doi.org/10.1093/nar/gkv1054
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