Cargando…
FLOR-ID: an interactive database of flowering-time gene networks in Arabidopsis thaliana
Flowering is a hot topic in Plant Biology and important progress has been made in Arabidopsis thaliana toward unraveling the genetic networks involved. The increasing complexity and the explosion of literature however require development of new tools for information management and update. We therefo...
Autores principales: | , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2016
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4702789/ https://www.ncbi.nlm.nih.gov/pubmed/26476447 http://dx.doi.org/10.1093/nar/gkv1054 |
_version_ | 1782408650672832512 |
---|---|
author | Bouché, Frédéric Lobet, Guillaume Tocquin, Pierre Périlleux, Claire |
author_facet | Bouché, Frédéric Lobet, Guillaume Tocquin, Pierre Périlleux, Claire |
author_sort | Bouché, Frédéric |
collection | PubMed |
description | Flowering is a hot topic in Plant Biology and important progress has been made in Arabidopsis thaliana toward unraveling the genetic networks involved. The increasing complexity and the explosion of literature however require development of new tools for information management and update. We therefore created an evolutive and interactive database of flowering time genes, named FLOR-ID (Flowering-Interactive Database), which is freely accessible at http://www.flor-id.org. The hand-curated database contains information on 306 genes and links to 1595 publications gathering the work of >4500 authors. Gene/protein functions and interactions within the flowering pathways were inferred from the analysis of related publications, included in the database and translated into interactive manually drawn snapshots. |
format | Online Article Text |
id | pubmed-4702789 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-47027892016-01-07 FLOR-ID: an interactive database of flowering-time gene networks in Arabidopsis thaliana Bouché, Frédéric Lobet, Guillaume Tocquin, Pierre Périlleux, Claire Nucleic Acids Res Database Issue Flowering is a hot topic in Plant Biology and important progress has been made in Arabidopsis thaliana toward unraveling the genetic networks involved. The increasing complexity and the explosion of literature however require development of new tools for information management and update. We therefore created an evolutive and interactive database of flowering time genes, named FLOR-ID (Flowering-Interactive Database), which is freely accessible at http://www.flor-id.org. The hand-curated database contains information on 306 genes and links to 1595 publications gathering the work of >4500 authors. Gene/protein functions and interactions within the flowering pathways were inferred from the analysis of related publications, included in the database and translated into interactive manually drawn snapshots. Oxford University Press 2016-01-04 2015-10-17 /pmc/articles/PMC4702789/ /pubmed/26476447 http://dx.doi.org/10.1093/nar/gkv1054 Text en © The Author(s) 2015. Published by Oxford University Press on behalf of Nucleic Acids Research. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com |
spellingShingle | Database Issue Bouché, Frédéric Lobet, Guillaume Tocquin, Pierre Périlleux, Claire FLOR-ID: an interactive database of flowering-time gene networks in Arabidopsis thaliana |
title | FLOR-ID: an interactive database of flowering-time gene networks in Arabidopsis thaliana |
title_full | FLOR-ID: an interactive database of flowering-time gene networks in Arabidopsis thaliana |
title_fullStr | FLOR-ID: an interactive database of flowering-time gene networks in Arabidopsis thaliana |
title_full_unstemmed | FLOR-ID: an interactive database of flowering-time gene networks in Arabidopsis thaliana |
title_short | FLOR-ID: an interactive database of flowering-time gene networks in Arabidopsis thaliana |
title_sort | flor-id: an interactive database of flowering-time gene networks in arabidopsis thaliana |
topic | Database Issue |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4702789/ https://www.ncbi.nlm.nih.gov/pubmed/26476447 http://dx.doi.org/10.1093/nar/gkv1054 |
work_keys_str_mv | AT bouchefrederic floridaninteractivedatabaseoffloweringtimegenenetworksinarabidopsisthaliana AT lobetguillaume floridaninteractivedatabaseoffloweringtimegenenetworksinarabidopsisthaliana AT tocquinpierre floridaninteractivedatabaseoffloweringtimegenenetworksinarabidopsisthaliana AT perilleuxclaire floridaninteractivedatabaseoffloweringtimegenenetworksinarabidopsisthaliana |