5SRNAdb: an information resource for 5S ribosomal RNAs

Ribosomal 5S RNA (5S rRNA) is the ubiquitous RNA component found in the large subunit of ribosomes in all known organisms. Due to its small size, abundance and evolutionary conservation 5S rRNA for many years now is used as a model molecule in studies on RNA structure, RNA–protein interactions and m...

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Detalles Bibliográficos
Autores principales: Szymanski, Maciej, Zielezinski, Andrzej, Barciszewski, Jan, Erdmann, Volker A., Karlowski, Wojciech M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2016
Materias:
Database Issue
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4702797/
https://www.ncbi.nlm.nih.gov/pubmed/26490961
http://dx.doi.org/10.1093/nar/gkv1081
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author Szymanski, Maciej
Zielezinski, Andrzej
Barciszewski, Jan
Erdmann, Volker A.
Karlowski, Wojciech M.
author_facet Szymanski, Maciej
Zielezinski, Andrzej
Barciszewski, Jan
Erdmann, Volker A.
Karlowski, Wojciech M.
author_sort Szymanski, Maciej
collection PubMed
description Ribosomal 5S RNA (5S rRNA) is the ubiquitous RNA component found in the large subunit of ribosomes in all known organisms. Due to its small size, abundance and evolutionary conservation 5S rRNA for many years now is used as a model molecule in studies on RNA structure, RNA–protein interactions and molecular phylogeny. 5SRNAdb (http://combio.pl/5srnadb/) is the first database that provides a high quality reference set of ribosomal 5S RNAs (5S rRNA) across three domains of life. Here, we give an overview of new developments in the database and associated web tools since 2002, including updates to database content, curation processes and user web interfaces.
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spelling pubmed-47027972016-01-07 5SRNAdb: an information resource for 5S ribosomal RNAs Szymanski, Maciej Zielezinski, Andrzej Barciszewski, Jan Erdmann, Volker A. Karlowski, Wojciech M. Nucleic Acids Res Database Issue Ribosomal 5S RNA (5S rRNA) is the ubiquitous RNA component found in the large subunit of ribosomes in all known organisms. Due to its small size, abundance and evolutionary conservation 5S rRNA for many years now is used as a model molecule in studies on RNA structure, RNA–protein interactions and molecular phylogeny. 5SRNAdb (http://combio.pl/5srnadb/) is the first database that provides a high quality reference set of ribosomal 5S RNAs (5S rRNA) across three domains of life. Here, we give an overview of new developments in the database and associated web tools since 2002, including updates to database content, curation processes and user web interfaces. Oxford University Press 2016-01-04 2015-10-20 /pmc/articles/PMC4702797/ /pubmed/26490961 http://dx.doi.org/10.1093/nar/gkv1081 Text en © The Author(s) 2015. Published by Oxford University Press on behalf of Nucleic Acids Research. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Database Issue
Szymanski, Maciej
Zielezinski, Andrzej
Barciszewski, Jan
Erdmann, Volker A.
Karlowski, Wojciech M.
5SRNAdb: an information resource for 5S ribosomal RNAs
title 5SRNAdb: an information resource for 5S ribosomal RNAs
title_full 5SRNAdb: an information resource for 5S ribosomal RNAs
title_fullStr 5SRNAdb: an information resource for 5S ribosomal RNAs
title_full_unstemmed 5SRNAdb: an information resource for 5S ribosomal RNAs
title_short 5SRNAdb: an information resource for 5S ribosomal RNAs
title_sort 5srnadb: an information resource for 5s ribosomal rnas
topic Database Issue
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4702797/
https://www.ncbi.nlm.nih.gov/pubmed/26490961
http://dx.doi.org/10.1093/nar/gkv1081
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