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Norine, the knowledgebase dedicated to non-ribosomal peptides, is now open to crowdsourcing
Since its creation in 2006, Norine remains the unique knowledgebase dedicated to non-ribosomal peptides (NRPs). These secondary metabolites, produced by bacteria and fungi, harbor diverse interesting biological activities (such as antibiotic, antitumor, siderophore or surfactant) directly related to...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4702827/ https://www.ncbi.nlm.nih.gov/pubmed/26527733 http://dx.doi.org/10.1093/nar/gkv1143 |
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author | Flissi, Areski Dufresne, Yoann Michalik, Juraj Tonon, Laurie Janot, Stéphane Noé, Laurent Jacques, Philippe Leclère, Valérie Pupin, Maude |
author_facet | Flissi, Areski Dufresne, Yoann Michalik, Juraj Tonon, Laurie Janot, Stéphane Noé, Laurent Jacques, Philippe Leclère, Valérie Pupin, Maude |
author_sort | Flissi, Areski |
collection | PubMed |
description | Since its creation in 2006, Norine remains the unique knowledgebase dedicated to non-ribosomal peptides (NRPs). These secondary metabolites, produced by bacteria and fungi, harbor diverse interesting biological activities (such as antibiotic, antitumor, siderophore or surfactant) directly related to the diversity of their structures. The Norine team goal is to collect the NRPs and provide tools to analyze them efficiently. We have developed a user-friendly interface and dedicated tools to provide a complete bioinformatics platform. The knowledgebase gathers abundant and valuable annotations on more than 1100 NRPs. To increase the quantity of described NRPs and improve the quality of associated annotations, we are now opening Norine to crowdsourcing. We believe that contributors from the scientific community are the best experts to annotate the NRPs they work on. We have developed MyNorine to facilitate the submission of new NRPs or modifications of stored ones. This article presents MyNorine and other novelties of Norine interface released since the first publication. Norine is freely accessible from the following URL: http://bioinfo.lifl.fr/NRP. |
format | Online Article Text |
id | pubmed-4702827 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-47028272016-01-07 Norine, the knowledgebase dedicated to non-ribosomal peptides, is now open to crowdsourcing Flissi, Areski Dufresne, Yoann Michalik, Juraj Tonon, Laurie Janot, Stéphane Noé, Laurent Jacques, Philippe Leclère, Valérie Pupin, Maude Nucleic Acids Res Database Issue Since its creation in 2006, Norine remains the unique knowledgebase dedicated to non-ribosomal peptides (NRPs). These secondary metabolites, produced by bacteria and fungi, harbor diverse interesting biological activities (such as antibiotic, antitumor, siderophore or surfactant) directly related to the diversity of their structures. The Norine team goal is to collect the NRPs and provide tools to analyze them efficiently. We have developed a user-friendly interface and dedicated tools to provide a complete bioinformatics platform. The knowledgebase gathers abundant and valuable annotations on more than 1100 NRPs. To increase the quantity of described NRPs and improve the quality of associated annotations, we are now opening Norine to crowdsourcing. We believe that contributors from the scientific community are the best experts to annotate the NRPs they work on. We have developed MyNorine to facilitate the submission of new NRPs or modifications of stored ones. This article presents MyNorine and other novelties of Norine interface released since the first publication. Norine is freely accessible from the following URL: http://bioinfo.lifl.fr/NRP. Oxford University Press 2016-01-04 2015-11-02 /pmc/articles/PMC4702827/ /pubmed/26527733 http://dx.doi.org/10.1093/nar/gkv1143 Text en © The Author(s) 2015. Published by Oxford University Press on behalf of Nucleic Acids Research. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com |
spellingShingle | Database Issue Flissi, Areski Dufresne, Yoann Michalik, Juraj Tonon, Laurie Janot, Stéphane Noé, Laurent Jacques, Philippe Leclère, Valérie Pupin, Maude Norine, the knowledgebase dedicated to non-ribosomal peptides, is now open to crowdsourcing |
title | Norine, the knowledgebase dedicated to non-ribosomal peptides, is now open to crowdsourcing |
title_full | Norine, the knowledgebase dedicated to non-ribosomal peptides, is now open to crowdsourcing |
title_fullStr | Norine, the knowledgebase dedicated to non-ribosomal peptides, is now open to crowdsourcing |
title_full_unstemmed | Norine, the knowledgebase dedicated to non-ribosomal peptides, is now open to crowdsourcing |
title_short | Norine, the knowledgebase dedicated to non-ribosomal peptides, is now open to crowdsourcing |
title_sort | norine, the knowledgebase dedicated to non-ribosomal peptides, is now open to crowdsourcing |
topic | Database Issue |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4702827/ https://www.ncbi.nlm.nih.gov/pubmed/26527733 http://dx.doi.org/10.1093/nar/gkv1143 |
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