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WormBase 2016: expanding to enable helminth genomic research

WormBase (www.wormbase.org) is a central repository for research data on the biology, genetics and genomics of Caenorhabditis elegans and other nematodes. The project has evolved from its original remit to collect and integrate all data for a single species, and now extends to numerous nematodes, ra...

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Autores principales: Howe, Kevin L., Bolt, Bruce J., Cain, Scott, Chan, Juancarlos, Chen, Wen J., Davis, Paul, Done, James, Down, Thomas, Gao, Sibyl, Grove, Christian, Harris, Todd W., Kishore, Ranjana, Lee, Raymond, Lomax, Jane, Li, Yuling, Muller, Hans-Michael, Nakamura, Cecilia, Nuin, Paulo, Paulini, Michael, Raciti, Daniela, Schindelman, Gary, Stanley, Eleanor, Tuli, Mary Ann, Van Auken, Kimberly, Wang, Daniel, Wang, Xiaodong, Williams, Gary, Wright, Adam, Yook, Karen, Berriman, Matthew, Kersey, Paul, Schedl, Tim, Stein, Lincoln, Sternberg, Paul W.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4702863/
https://www.ncbi.nlm.nih.gov/pubmed/26578572
http://dx.doi.org/10.1093/nar/gkv1217
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author Howe, Kevin L.
Bolt, Bruce J.
Cain, Scott
Chan, Juancarlos
Chen, Wen J.
Davis, Paul
Done, James
Down, Thomas
Gao, Sibyl
Grove, Christian
Harris, Todd W.
Kishore, Ranjana
Lee, Raymond
Lomax, Jane
Li, Yuling
Muller, Hans-Michael
Nakamura, Cecilia
Nuin, Paulo
Paulini, Michael
Raciti, Daniela
Schindelman, Gary
Stanley, Eleanor
Tuli, Mary Ann
Van Auken, Kimberly
Wang, Daniel
Wang, Xiaodong
Williams, Gary
Wright, Adam
Yook, Karen
Berriman, Matthew
Kersey, Paul
Schedl, Tim
Stein, Lincoln
Sternberg, Paul W.
author_facet Howe, Kevin L.
Bolt, Bruce J.
Cain, Scott
Chan, Juancarlos
Chen, Wen J.
Davis, Paul
Done, James
Down, Thomas
Gao, Sibyl
Grove, Christian
Harris, Todd W.
Kishore, Ranjana
Lee, Raymond
Lomax, Jane
Li, Yuling
Muller, Hans-Michael
Nakamura, Cecilia
Nuin, Paulo
Paulini, Michael
Raciti, Daniela
Schindelman, Gary
Stanley, Eleanor
Tuli, Mary Ann
Van Auken, Kimberly
Wang, Daniel
Wang, Xiaodong
Williams, Gary
Wright, Adam
Yook, Karen
Berriman, Matthew
Kersey, Paul
Schedl, Tim
Stein, Lincoln
Sternberg, Paul W.
author_sort Howe, Kevin L.
collection PubMed
description WormBase (www.wormbase.org) is a central repository for research data on the biology, genetics and genomics of Caenorhabditis elegans and other nematodes. The project has evolved from its original remit to collect and integrate all data for a single species, and now extends to numerous nematodes, ranging from evolutionary comparators of C. elegans to parasitic species that threaten plant, animal and human health. Research activity using C. elegans as a model system is as vibrant as ever, and we have created new tools for community curation in response to the ever-increasing volume and complexity of data. To better allow users to navigate their way through these data, we have made a number of improvements to our main website, including new tools for browsing genomic features and ontology annotations. Finally, we have developed a new portal for parasitic worm genomes. WormBase ParaSite (parasite.wormbase.org) contains all publicly available nematode and platyhelminth annotated genome sequences, and is designed specifically to support helminth genomic research.
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spelling pubmed-47028632016-01-07 WormBase 2016: expanding to enable helminth genomic research Howe, Kevin L. Bolt, Bruce J. Cain, Scott Chan, Juancarlos Chen, Wen J. Davis, Paul Done, James Down, Thomas Gao, Sibyl Grove, Christian Harris, Todd W. Kishore, Ranjana Lee, Raymond Lomax, Jane Li, Yuling Muller, Hans-Michael Nakamura, Cecilia Nuin, Paulo Paulini, Michael Raciti, Daniela Schindelman, Gary Stanley, Eleanor Tuli, Mary Ann Van Auken, Kimberly Wang, Daniel Wang, Xiaodong Williams, Gary Wright, Adam Yook, Karen Berriman, Matthew Kersey, Paul Schedl, Tim Stein, Lincoln Sternberg, Paul W. Nucleic Acids Res Database Issue WormBase (www.wormbase.org) is a central repository for research data on the biology, genetics and genomics of Caenorhabditis elegans and other nematodes. The project has evolved from its original remit to collect and integrate all data for a single species, and now extends to numerous nematodes, ranging from evolutionary comparators of C. elegans to parasitic species that threaten plant, animal and human health. Research activity using C. elegans as a model system is as vibrant as ever, and we have created new tools for community curation in response to the ever-increasing volume and complexity of data. To better allow users to navigate their way through these data, we have made a number of improvements to our main website, including new tools for browsing genomic features and ontology annotations. Finally, we have developed a new portal for parasitic worm genomes. WormBase ParaSite (parasite.wormbase.org) contains all publicly available nematode and platyhelminth annotated genome sequences, and is designed specifically to support helminth genomic research. Oxford University Press 2016-01-04 2015-11-17 /pmc/articles/PMC4702863/ /pubmed/26578572 http://dx.doi.org/10.1093/nar/gkv1217 Text en © The Author(s) 2015. Published by Oxford University Press on behalf of Nucleic Acids Research. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Database Issue
Howe, Kevin L.
Bolt, Bruce J.
Cain, Scott
Chan, Juancarlos
Chen, Wen J.
Davis, Paul
Done, James
Down, Thomas
Gao, Sibyl
Grove, Christian
Harris, Todd W.
Kishore, Ranjana
Lee, Raymond
Lomax, Jane
Li, Yuling
Muller, Hans-Michael
Nakamura, Cecilia
Nuin, Paulo
Paulini, Michael
Raciti, Daniela
Schindelman, Gary
Stanley, Eleanor
Tuli, Mary Ann
Van Auken, Kimberly
Wang, Daniel
Wang, Xiaodong
Williams, Gary
Wright, Adam
Yook, Karen
Berriman, Matthew
Kersey, Paul
Schedl, Tim
Stein, Lincoln
Sternberg, Paul W.
WormBase 2016: expanding to enable helminth genomic research
title WormBase 2016: expanding to enable helminth genomic research
title_full WormBase 2016: expanding to enable helminth genomic research
title_fullStr WormBase 2016: expanding to enable helminth genomic research
title_full_unstemmed WormBase 2016: expanding to enable helminth genomic research
title_short WormBase 2016: expanding to enable helminth genomic research
title_sort wormbase 2016: expanding to enable helminth genomic research
topic Database Issue
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4702863/
https://www.ncbi.nlm.nih.gov/pubmed/26578572
http://dx.doi.org/10.1093/nar/gkv1217
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