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Biocuration of functional annotation at the European nucleotide archive
The European Nucleotide Archive (ENA; http://www.ebi.ac.uk/ena) is a repository for the submission, maintenance and presentation of nucleotide sequence data and related sample and experimental information. In this article we report on ENA in 2015 regarding general activity, notable published data se...
Autores principales: | , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4702917/ https://www.ncbi.nlm.nih.gov/pubmed/26615190 http://dx.doi.org/10.1093/nar/gkv1311 |
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author | Gibson, Richard Alako, Blaise Amid, Clara Cerdeño-Tárraga, Ana Cleland, Iain Goodgame, Neil ten Hoopen, Petra Jayathilaka, Suran Kay, Simon Leinonen, Rasko Liu, Xin Pallreddy, Swapna Pakseresht, Nima Rajan, Jeena Rosselló, Marc Silvester, Nicole Smirnov, Dmitriy Toribio, Ana Luisa Vaughan, Daniel Zalunin, Vadim Cochrane, Guy |
author_facet | Gibson, Richard Alako, Blaise Amid, Clara Cerdeño-Tárraga, Ana Cleland, Iain Goodgame, Neil ten Hoopen, Petra Jayathilaka, Suran Kay, Simon Leinonen, Rasko Liu, Xin Pallreddy, Swapna Pakseresht, Nima Rajan, Jeena Rosselló, Marc Silvester, Nicole Smirnov, Dmitriy Toribio, Ana Luisa Vaughan, Daniel Zalunin, Vadim Cochrane, Guy |
author_sort | Gibson, Richard |
collection | PubMed |
description | The European Nucleotide Archive (ENA; http://www.ebi.ac.uk/ena) is a repository for the submission, maintenance and presentation of nucleotide sequence data and related sample and experimental information. In this article we report on ENA in 2015 regarding general activity, notable published data sets and major achievements. This is followed by a focus on sustainable biocuration of functional annotation, an area which has particularly felt the pressure of sequencing growth. The importance of functional annotation, how it can be submitted and the shifting role of the biocurator in the context of increasing volumes of data are all discussed. |
format | Online Article Text |
id | pubmed-4702917 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-47029172016-01-07 Biocuration of functional annotation at the European nucleotide archive Gibson, Richard Alako, Blaise Amid, Clara Cerdeño-Tárraga, Ana Cleland, Iain Goodgame, Neil ten Hoopen, Petra Jayathilaka, Suran Kay, Simon Leinonen, Rasko Liu, Xin Pallreddy, Swapna Pakseresht, Nima Rajan, Jeena Rosselló, Marc Silvester, Nicole Smirnov, Dmitriy Toribio, Ana Luisa Vaughan, Daniel Zalunin, Vadim Cochrane, Guy Nucleic Acids Res Database Issue The European Nucleotide Archive (ENA; http://www.ebi.ac.uk/ena) is a repository for the submission, maintenance and presentation of nucleotide sequence data and related sample and experimental information. In this article we report on ENA in 2015 regarding general activity, notable published data sets and major achievements. This is followed by a focus on sustainable biocuration of functional annotation, an area which has particularly felt the pressure of sequencing growth. The importance of functional annotation, how it can be submitted and the shifting role of the biocurator in the context of increasing volumes of data are all discussed. Oxford University Press 2016-01-04 2015-11-28 /pmc/articles/PMC4702917/ /pubmed/26615190 http://dx.doi.org/10.1093/nar/gkv1311 Text en © The Author(s) 2015. Published by Oxford University Press on behalf of Nucleic Acids Research. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Database Issue Gibson, Richard Alako, Blaise Amid, Clara Cerdeño-Tárraga, Ana Cleland, Iain Goodgame, Neil ten Hoopen, Petra Jayathilaka, Suran Kay, Simon Leinonen, Rasko Liu, Xin Pallreddy, Swapna Pakseresht, Nima Rajan, Jeena Rosselló, Marc Silvester, Nicole Smirnov, Dmitriy Toribio, Ana Luisa Vaughan, Daniel Zalunin, Vadim Cochrane, Guy Biocuration of functional annotation at the European nucleotide archive |
title | Biocuration of functional annotation at the European nucleotide archive |
title_full | Biocuration of functional annotation at the European nucleotide archive |
title_fullStr | Biocuration of functional annotation at the European nucleotide archive |
title_full_unstemmed | Biocuration of functional annotation at the European nucleotide archive |
title_short | Biocuration of functional annotation at the European nucleotide archive |
title_sort | biocuration of functional annotation at the european nucleotide archive |
topic | Database Issue |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4702917/ https://www.ncbi.nlm.nih.gov/pubmed/26615190 http://dx.doi.org/10.1093/nar/gkv1311 |
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