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RNAseq analysis for the diagnosis of muscular dystrophy

The precise genetic cause remains elusive in nearly 50% of patients with presumed neurogenetic disease, representing a significant barrier for clinical care. This is despite significant advances in clinical genetic diagnostics, including the application of whole‐exome sequencing and next‐generation...

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Autores principales: Gonorazky, Hernan, Liang, Minggao, Cummings, Beryl, Lek, Monkol, Micallef, Johann, Hawkins, Cynthia, Basran, Raveen, Cohn, Ronald, Wilson, Michael D., MacArthur, Daniel, Marshall, Christian R., Ray, Peter N., Dowling, James J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4704476/
https://www.ncbi.nlm.nih.gov/pubmed/26783550
http://dx.doi.org/10.1002/acn3.267
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author Gonorazky, Hernan
Liang, Minggao
Cummings, Beryl
Lek, Monkol
Micallef, Johann
Hawkins, Cynthia
Basran, Raveen
Cohn, Ronald
Wilson, Michael D.
MacArthur, Daniel
Marshall, Christian R.
Ray, Peter N.
Dowling, James J.
author_facet Gonorazky, Hernan
Liang, Minggao
Cummings, Beryl
Lek, Monkol
Micallef, Johann
Hawkins, Cynthia
Basran, Raveen
Cohn, Ronald
Wilson, Michael D.
MacArthur, Daniel
Marshall, Christian R.
Ray, Peter N.
Dowling, James J.
author_sort Gonorazky, Hernan
collection PubMed
description The precise genetic cause remains elusive in nearly 50% of patients with presumed neurogenetic disease, representing a significant barrier for clinical care. This is despite significant advances in clinical genetic diagnostics, including the application of whole‐exome sequencing and next‐generation sequencing‐based gene panels. In this study, we identify a deep intronic mutation in the DMD gene in a patient with muscular dystrophy using both conventional and RNAseq‐based transcriptome analyses. The implications of our data are that noncoding mutations likely comprise an important source of unresolved genetic disease and that RNAseq is a powerful platform for detecting such mutations.
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spelling pubmed-47044762016-01-18 RNAseq analysis for the diagnosis of muscular dystrophy Gonorazky, Hernan Liang, Minggao Cummings, Beryl Lek, Monkol Micallef, Johann Hawkins, Cynthia Basran, Raveen Cohn, Ronald Wilson, Michael D. MacArthur, Daniel Marshall, Christian R. Ray, Peter N. Dowling, James J. Ann Clin Transl Neurol Brief Communication The precise genetic cause remains elusive in nearly 50% of patients with presumed neurogenetic disease, representing a significant barrier for clinical care. This is despite significant advances in clinical genetic diagnostics, including the application of whole‐exome sequencing and next‐generation sequencing‐based gene panels. In this study, we identify a deep intronic mutation in the DMD gene in a patient with muscular dystrophy using both conventional and RNAseq‐based transcriptome analyses. The implications of our data are that noncoding mutations likely comprise an important source of unresolved genetic disease and that RNAseq is a powerful platform for detecting such mutations. John Wiley and Sons Inc. 2015-12-08 /pmc/articles/PMC4704476/ /pubmed/26783550 http://dx.doi.org/10.1002/acn3.267 Text en © 2015 The Authors. Annals of Clinical and Translational Neurology published by Wiley Periodicals, Inc on behalf of American Neurological Association. This is an open access article under the terms of the Creative Commons Attribution‐NonCommercial‐NoDerivs (http://creativecommons.org/licenses/by-nc-nd/4.0/) License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made.
spellingShingle Brief Communication
Gonorazky, Hernan
Liang, Minggao
Cummings, Beryl
Lek, Monkol
Micallef, Johann
Hawkins, Cynthia
Basran, Raveen
Cohn, Ronald
Wilson, Michael D.
MacArthur, Daniel
Marshall, Christian R.
Ray, Peter N.
Dowling, James J.
RNAseq analysis for the diagnosis of muscular dystrophy
title RNAseq analysis for the diagnosis of muscular dystrophy
title_full RNAseq analysis for the diagnosis of muscular dystrophy
title_fullStr RNAseq analysis for the diagnosis of muscular dystrophy
title_full_unstemmed RNAseq analysis for the diagnosis of muscular dystrophy
title_short RNAseq analysis for the diagnosis of muscular dystrophy
title_sort rnaseq analysis for the diagnosis of muscular dystrophy
topic Brief Communication
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4704476/
https://www.ncbi.nlm.nih.gov/pubmed/26783550
http://dx.doi.org/10.1002/acn3.267
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