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The genotypic diversity and lipase production of some thermophilic bacilli from different genera

Thermophilic 32 isolates and 20 reference bacilli were subjected to Rep-PCR and ITS-PCR fingerprinting for determination of their genotypic diversity, before screening lipase activities. By these methods, all the isolates and references could easily be differentiated up to subspecies level from each...

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Autores principales: Koc, Melih, Cokmus, Cumhur, Cihan, Arzu Coleri
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Sociedade Brasileira de Microbiologia 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4704621/
https://www.ncbi.nlm.nih.gov/pubmed/26691464
http://dx.doi.org/10.1590/S1517-838246420140942
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author Koc, Melih
Cokmus, Cumhur
Cihan, Arzu Coleri
author_facet Koc, Melih
Cokmus, Cumhur
Cihan, Arzu Coleri
author_sort Koc, Melih
collection PubMed
description Thermophilic 32 isolates and 20 reference bacilli were subjected to Rep-PCR and ITS-PCR fingerprinting for determination of their genotypic diversity, before screening lipase activities. By these methods, all the isolates and references could easily be differentiated up to subspecies level from each other. In screening assay, 11 isolates and 7 references were found to be lipase producing. Their extracellular lipase activities were measured quantitatively by incubating in both tributyrin and olive oil broths at 60 °C and pH 7.0. During the 24, 48 and 72-h period of incubation, the changes in the lipase activities, culture absorbance, wet weight of biomass and pH were all measured. The activity was determined by using pNPB in 50 mM phosphate buffer at pH 7.0 at 60 °C. The lipase production of the isolates in olive oil broths varied between 0.008 and 0.052, whereas these values were found to be 0.002-0.019 (U/mL) in the case of tyributyrin. For comparison, an index was established by dividing the lipase activities to cell biomass (U/mg). The maximum thermostable lipase production was achieved by the isolates F84a, F84b, and G. thermodenitrificans DSM 465(T) (0.009, 0.008 and 0.008 U/mg) within olive oil broth, whereas G. stearothermophilus A113 displayed the highest lipase activity than its type strain in tyributyrin. Therefore, as some of these isolates displayed higher activities in comparison to references, new lipase producing bacilli were determined by presenting their genotypic diversity with DNA fingerprinting techniques.
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spelling pubmed-47046212016-01-14 The genotypic diversity and lipase production of some thermophilic bacilli from different genera Koc, Melih Cokmus, Cumhur Cihan, Arzu Coleri Braz J Microbiol Environmental Microbiology Thermophilic 32 isolates and 20 reference bacilli were subjected to Rep-PCR and ITS-PCR fingerprinting for determination of their genotypic diversity, before screening lipase activities. By these methods, all the isolates and references could easily be differentiated up to subspecies level from each other. In screening assay, 11 isolates and 7 references were found to be lipase producing. Their extracellular lipase activities were measured quantitatively by incubating in both tributyrin and olive oil broths at 60 °C and pH 7.0. During the 24, 48 and 72-h period of incubation, the changes in the lipase activities, culture absorbance, wet weight of biomass and pH were all measured. The activity was determined by using pNPB in 50 mM phosphate buffer at pH 7.0 at 60 °C. The lipase production of the isolates in olive oil broths varied between 0.008 and 0.052, whereas these values were found to be 0.002-0.019 (U/mL) in the case of tyributyrin. For comparison, an index was established by dividing the lipase activities to cell biomass (U/mg). The maximum thermostable lipase production was achieved by the isolates F84a, F84b, and G. thermodenitrificans DSM 465(T) (0.009, 0.008 and 0.008 U/mg) within olive oil broth, whereas G. stearothermophilus A113 displayed the highest lipase activity than its type strain in tyributyrin. Therefore, as some of these isolates displayed higher activities in comparison to references, new lipase producing bacilli were determined by presenting their genotypic diversity with DNA fingerprinting techniques. Sociedade Brasileira de Microbiologia 2015-12-01 /pmc/articles/PMC4704621/ /pubmed/26691464 http://dx.doi.org/10.1590/S1517-838246420140942 Text en Copyright © 2015, Sociedade Brasileira de Microbiologia http://creativecommons.org/licenses/by-nc/4.0/ All the content of the journal, except where otherwise noted, is licensed under a Creative Commons License CC BY-NC.
spellingShingle Environmental Microbiology
Koc, Melih
Cokmus, Cumhur
Cihan, Arzu Coleri
The genotypic diversity and lipase production of some thermophilic bacilli from different genera
title The genotypic diversity and lipase production of some thermophilic bacilli from different genera
title_full The genotypic diversity and lipase production of some thermophilic bacilli from different genera
title_fullStr The genotypic diversity and lipase production of some thermophilic bacilli from different genera
title_full_unstemmed The genotypic diversity and lipase production of some thermophilic bacilli from different genera
title_short The genotypic diversity and lipase production of some thermophilic bacilli from different genera
title_sort genotypic diversity and lipase production of some thermophilic bacilli from different genera
topic Environmental Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4704621/
https://www.ncbi.nlm.nih.gov/pubmed/26691464
http://dx.doi.org/10.1590/S1517-838246420140942
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