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Characterization of a thermostable endoglucanase produced by Isoptericola variabilis sp. IDAH9

This study aimed to isolate and evaluate the cellulase activity of cellulolytic bacteria in hot springs of Dehloran, Ilam province, Iran. Water and sludge samples were collected from the hot springs and the bacterial enrichment was performed in a medium containing rice barn and carboxymethyl cellulo...

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Autores principales: Azizi, Maryam, Hemmat, Jafar, Seifati, Seyed Morteza, Torktaz, Ibrahim, Karimi, Soodabeh
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Sociedade Brasileira de Microbiologia 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4704623/
https://www.ncbi.nlm.nih.gov/pubmed/26691485
http://dx.doi.org/10.1590/S1517-838246420140846
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author Azizi, Maryam
Hemmat, Jafar
Seifati, Seyed Morteza
Torktaz, Ibrahim
Karimi, Soodabeh
author_facet Azizi, Maryam
Hemmat, Jafar
Seifati, Seyed Morteza
Torktaz, Ibrahim
Karimi, Soodabeh
author_sort Azizi, Maryam
collection PubMed
description This study aimed to isolate and evaluate the cellulase activity of cellulolytic bacteria in hot springs of Dehloran, Ilam province, Iran. Water and sludge samples were collected from the hot springs and the bacterial enrichment was performed in a medium containing rice barn and carboxymethyl cellulose (CMC). The cultures were incubated at 50 °C in aerobic conditions. The bacteria were isolated on CMC agar (1%) medium. Cellulase assay of the isolates was measured by the evaluation of endoglucanase enzyme activity, which is also called as carboxymethyl cellulase (CMCase). The isolated thermotolerant bacteria were then identified and optimized for the production of CMCase. Moreover, stabilizing elements of the enzyme were identified with in silico approach. The chosen isolate was identified as Isoptericola variabilis sp. IDAH9. The identified strain produced the most thermostable CMCase at a concentration of 5.6 g/L of ammonium sulfate, 9 g/L CMCase or 12 g/L rice bran, 0/6% Tween-80, and 0.2% sucrose. The produced enzyme showed 80% of the residual activity after 1 h of incubation at 65 °C. In silico data indicated that the remaining residual activity was due to the redundant stabilizing elements in the protein structure. Consequently, I. variabilis can be isolated from the extreme environment and has a thermostable endoglucanase which may be used for various applications after studying them.
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spelling pubmed-47046232016-01-14 Characterization of a thermostable endoglucanase produced by Isoptericola variabilis sp. IDAH9 Azizi, Maryam Hemmat, Jafar Seifati, Seyed Morteza Torktaz, Ibrahim Karimi, Soodabeh Braz J Microbiol Industrial Microbiology This study aimed to isolate and evaluate the cellulase activity of cellulolytic bacteria in hot springs of Dehloran, Ilam province, Iran. Water and sludge samples were collected from the hot springs and the bacterial enrichment was performed in a medium containing rice barn and carboxymethyl cellulose (CMC). The cultures were incubated at 50 °C in aerobic conditions. The bacteria were isolated on CMC agar (1%) medium. Cellulase assay of the isolates was measured by the evaluation of endoglucanase enzyme activity, which is also called as carboxymethyl cellulase (CMCase). The isolated thermotolerant bacteria were then identified and optimized for the production of CMCase. Moreover, stabilizing elements of the enzyme were identified with in silico approach. The chosen isolate was identified as Isoptericola variabilis sp. IDAH9. The identified strain produced the most thermostable CMCase at a concentration of 5.6 g/L of ammonium sulfate, 9 g/L CMCase or 12 g/L rice bran, 0/6% Tween-80, and 0.2% sucrose. The produced enzyme showed 80% of the residual activity after 1 h of incubation at 65 °C. In silico data indicated that the remaining residual activity was due to the redundant stabilizing elements in the protein structure. Consequently, I. variabilis can be isolated from the extreme environment and has a thermostable endoglucanase which may be used for various applications after studying them. Sociedade Brasileira de Microbiologia 2015-12-01 /pmc/articles/PMC4704623/ /pubmed/26691485 http://dx.doi.org/10.1590/S1517-838246420140846 Text en Copyright © 2015, Sociedade Brasileira de Microbiologia http://creativecommons.org/licenses/by-nc/4.0/ All the content of the journal, except where otherwise noted, is licensed under a Creative Commons License CC BY-NC.
spellingShingle Industrial Microbiology
Azizi, Maryam
Hemmat, Jafar
Seifati, Seyed Morteza
Torktaz, Ibrahim
Karimi, Soodabeh
Characterization of a thermostable endoglucanase produced by Isoptericola variabilis sp. IDAH9
title Characterization of a thermostable endoglucanase produced by Isoptericola variabilis sp. IDAH9
title_full Characterization of a thermostable endoglucanase produced by Isoptericola variabilis sp. IDAH9
title_fullStr Characterization of a thermostable endoglucanase produced by Isoptericola variabilis sp. IDAH9
title_full_unstemmed Characterization of a thermostable endoglucanase produced by Isoptericola variabilis sp. IDAH9
title_short Characterization of a thermostable endoglucanase produced by Isoptericola variabilis sp. IDAH9
title_sort characterization of a thermostable endoglucanase produced by isoptericola variabilis sp. idah9
topic Industrial Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4704623/
https://www.ncbi.nlm.nih.gov/pubmed/26691485
http://dx.doi.org/10.1590/S1517-838246420140846
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