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A 2:1 co-crystal of p-nitrobenzoic acid and N,N′-bis(pyridin-3-ylmethyl)ethanediamide: crystal structure and Hirshfeld surface analysis
The title 2:1 co-crystal, 2C(7)H(5)NO(4)·C(14)H(14)N(4)O(2), in which the complete diamide molecule is generated by crystallographic inversion symmetry, features a three-molecule aggregate sustained by hydroxyl-O—H⋯N(pyridyl) hydrogen bonds. The p-nitrobenzoic acid molecule is non-planar, exhi...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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International Union of Crystallography
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4704746/ https://www.ncbi.nlm.nih.gov/pubmed/26870591 http://dx.doi.org/10.1107/S2056989015024068 |
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author | Syed, Sabrina Halim, Siti Nadiah Abdul Jotani, Mukesh M. Tiekink, Edward R. T. |
author_facet | Syed, Sabrina Halim, Siti Nadiah Abdul Jotani, Mukesh M. Tiekink, Edward R. T. |
author_sort | Syed, Sabrina |
collection | PubMed |
description | The title 2:1 co-crystal, 2C(7)H(5)NO(4)·C(14)H(14)N(4)O(2), in which the complete diamide molecule is generated by crystallographic inversion symmetry, features a three-molecule aggregate sustained by hydroxyl-O—H⋯N(pyridyl) hydrogen bonds. The p-nitrobenzoic acid molecule is non-planar, exhibiting twists of both the carboxylic acid and nitro groups, which form dihedral angles of 10.16 (9) and 4.24 (4)°, respectively, with the benzene ring. The diamide molecule has a conformation approximating to a Z shape, with the pyridyl rings lying to either side of the central, almost planar diamide residue (r.m.s. deviation of the eight atoms being 0.025 Å), and forming dihedral angles of 77.22 (6)° with it. In the crystal, three-molecule aggregates are linked into a linear supramolecular ladder sustained by amide-N—H⋯O(nitro) hydrogen bonds and orientated along [10-4]. The ladders are connected into a double layer via pyridyl- and benzene-C—H⋯O(amide) interactions, which, in turn, are connected into a three-dimensional architecture via π–π stacking interactions between pyridyl and benzene rings [inter-centroid distance = 3.6947 (8) Å]. An evaluation of the Hirshfeld surfaces confirm the importance of intermolecular interactions involving oxygen atoms as well as the π–π interactions. |
format | Online Article Text |
id | pubmed-4704746 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | International Union of Crystallography |
record_format | MEDLINE/PubMed |
spelling | pubmed-47047462016-02-11 A 2:1 co-crystal of p-nitrobenzoic acid and N,N′-bis(pyridin-3-ylmethyl)ethanediamide: crystal structure and Hirshfeld surface analysis Syed, Sabrina Halim, Siti Nadiah Abdul Jotani, Mukesh M. Tiekink, Edward R. T. Acta Crystallogr E Crystallogr Commun Research Communications The title 2:1 co-crystal, 2C(7)H(5)NO(4)·C(14)H(14)N(4)O(2), in which the complete diamide molecule is generated by crystallographic inversion symmetry, features a three-molecule aggregate sustained by hydroxyl-O—H⋯N(pyridyl) hydrogen bonds. The p-nitrobenzoic acid molecule is non-planar, exhibiting twists of both the carboxylic acid and nitro groups, which form dihedral angles of 10.16 (9) and 4.24 (4)°, respectively, with the benzene ring. The diamide molecule has a conformation approximating to a Z shape, with the pyridyl rings lying to either side of the central, almost planar diamide residue (r.m.s. deviation of the eight atoms being 0.025 Å), and forming dihedral angles of 77.22 (6)° with it. In the crystal, three-molecule aggregates are linked into a linear supramolecular ladder sustained by amide-N—H⋯O(nitro) hydrogen bonds and orientated along [10-4]. The ladders are connected into a double layer via pyridyl- and benzene-C—H⋯O(amide) interactions, which, in turn, are connected into a three-dimensional architecture via π–π stacking interactions between pyridyl and benzene rings [inter-centroid distance = 3.6947 (8) Å]. An evaluation of the Hirshfeld surfaces confirm the importance of intermolecular interactions involving oxygen atoms as well as the π–π interactions. International Union of Crystallography 2016-01-01 /pmc/articles/PMC4704746/ /pubmed/26870591 http://dx.doi.org/10.1107/S2056989015024068 Text en © Syed et al. 2016 http://creativecommons.org/licenses/by/2.0/uk/ This is an open-access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited. |
spellingShingle | Research Communications Syed, Sabrina Halim, Siti Nadiah Abdul Jotani, Mukesh M. Tiekink, Edward R. T. A 2:1 co-crystal of p-nitrobenzoic acid and N,N′-bis(pyridin-3-ylmethyl)ethanediamide: crystal structure and Hirshfeld surface analysis |
title | A 2:1 co-crystal of p-nitrobenzoic acid and N,N′-bis(pyridin-3-ylmethyl)ethanediamide: crystal structure and Hirshfeld surface analysis |
title_full | A 2:1 co-crystal of p-nitrobenzoic acid and N,N′-bis(pyridin-3-ylmethyl)ethanediamide: crystal structure and Hirshfeld surface analysis |
title_fullStr | A 2:1 co-crystal of p-nitrobenzoic acid and N,N′-bis(pyridin-3-ylmethyl)ethanediamide: crystal structure and Hirshfeld surface analysis |
title_full_unstemmed | A 2:1 co-crystal of p-nitrobenzoic acid and N,N′-bis(pyridin-3-ylmethyl)ethanediamide: crystal structure and Hirshfeld surface analysis |
title_short | A 2:1 co-crystal of p-nitrobenzoic acid and N,N′-bis(pyridin-3-ylmethyl)ethanediamide: crystal structure and Hirshfeld surface analysis |
title_sort | 2:1 co-crystal of p-nitrobenzoic acid and n,n′-bis(pyridin-3-ylmethyl)ethanediamide: crystal structure and hirshfeld surface analysis |
topic | Research Communications |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4704746/ https://www.ncbi.nlm.nih.gov/pubmed/26870591 http://dx.doi.org/10.1107/S2056989015024068 |
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