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Comparative MD Simulations Indicate a Dual Role for Arg132(3.50) in Dopamine-Dependent D2R Activation

Residue Arg(3.50) belongs to the highly conserved DRY-motif of class A GPCRs, which is located at the bottom of TM3. On the one hand, Arg(3.50) has been reported to help stabilize the inactive state of GPCRs, but on the other hand has also been shown to be crucial for stabilizing active receptor con...

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Detalles Bibliográficos
Autores principales: Kling, Ralf C., Clark, Timothy, Gmeiner, Peter
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4704829/
https://www.ncbi.nlm.nih.gov/pubmed/26741139
http://dx.doi.org/10.1371/journal.pone.0146612
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author Kling, Ralf C.
Clark, Timothy
Gmeiner, Peter
author_facet Kling, Ralf C.
Clark, Timothy
Gmeiner, Peter
author_sort Kling, Ralf C.
collection PubMed
description Residue Arg(3.50) belongs to the highly conserved DRY-motif of class A GPCRs, which is located at the bottom of TM3. On the one hand, Arg(3.50) has been reported to help stabilize the inactive state of GPCRs, but on the other hand has also been shown to be crucial for stabilizing active receptor conformations and mediating receptor-G protein coupling. The combined results of these studies suggest that the exact function of Arg(3.50) is likely to be receptor-dependent and must be characterized independently for every GPCR. Consequently, we now present comparative molecular-dynamics simulations that use our recently described inactive-state and Gα-bound active-state homology models of the dopamine D2 receptor (D2R), which are either bound to dopamine or ligand-free, performed to identify the function of Arg132(3.50) in D2R. Our results are consistent with a dynamic model of D2R activation in which Arg132(3.50) adopts a dual role, both by stabilizing the inactive-state receptor conformation and enhancing dopamine-dependent D2R-G protein coupling.
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spelling pubmed-47048292016-01-15 Comparative MD Simulations Indicate a Dual Role for Arg132(3.50) in Dopamine-Dependent D2R Activation Kling, Ralf C. Clark, Timothy Gmeiner, Peter PLoS One Research Article Residue Arg(3.50) belongs to the highly conserved DRY-motif of class A GPCRs, which is located at the bottom of TM3. On the one hand, Arg(3.50) has been reported to help stabilize the inactive state of GPCRs, but on the other hand has also been shown to be crucial for stabilizing active receptor conformations and mediating receptor-G protein coupling. The combined results of these studies suggest that the exact function of Arg(3.50) is likely to be receptor-dependent and must be characterized independently for every GPCR. Consequently, we now present comparative molecular-dynamics simulations that use our recently described inactive-state and Gα-bound active-state homology models of the dopamine D2 receptor (D2R), which are either bound to dopamine or ligand-free, performed to identify the function of Arg132(3.50) in D2R. Our results are consistent with a dynamic model of D2R activation in which Arg132(3.50) adopts a dual role, both by stabilizing the inactive-state receptor conformation and enhancing dopamine-dependent D2R-G protein coupling. Public Library of Science 2016-01-07 /pmc/articles/PMC4704829/ /pubmed/26741139 http://dx.doi.org/10.1371/journal.pone.0146612 Text en © 2016 Kling et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Kling, Ralf C.
Clark, Timothy
Gmeiner, Peter
Comparative MD Simulations Indicate a Dual Role for Arg132(3.50) in Dopamine-Dependent D2R Activation
title Comparative MD Simulations Indicate a Dual Role for Arg132(3.50) in Dopamine-Dependent D2R Activation
title_full Comparative MD Simulations Indicate a Dual Role for Arg132(3.50) in Dopamine-Dependent D2R Activation
title_fullStr Comparative MD Simulations Indicate a Dual Role for Arg132(3.50) in Dopamine-Dependent D2R Activation
title_full_unstemmed Comparative MD Simulations Indicate a Dual Role for Arg132(3.50) in Dopamine-Dependent D2R Activation
title_short Comparative MD Simulations Indicate a Dual Role for Arg132(3.50) in Dopamine-Dependent D2R Activation
title_sort comparative md simulations indicate a dual role for arg132(3.50) in dopamine-dependent d2r activation
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4704829/
https://www.ncbi.nlm.nih.gov/pubmed/26741139
http://dx.doi.org/10.1371/journal.pone.0146612
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