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Real-Time and Retrospective Health-Analytics-as-a-Service: A Novel Framework

BACKGROUND: Analytics-as-a-service (AaaS) is one of the latest provisions emerging from the cloud services family. Utilizing this paradigm of computing in health informatics will benefit patients, care providers, and governments significantly. This work is a novel approach to realize health analytics...

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Autores principales: Khazaei, Hamzeh, McGregor, Carolyn, Eklund, J Mikael, El-Khatib, Khalil
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Gunther Eysenbach 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4704962/
https://www.ncbi.nlm.nih.gov/pubmed/26582268
http://dx.doi.org/10.2196/medinform.4640
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author Khazaei, Hamzeh
McGregor, Carolyn
Eklund, J Mikael
El-Khatib, Khalil
author_facet Khazaei, Hamzeh
McGregor, Carolyn
Eklund, J Mikael
El-Khatib, Khalil
author_sort Khazaei, Hamzeh
collection PubMed
description BACKGROUND: Analytics-as-a-service (AaaS) is one of the latest provisions emerging from the cloud services family. Utilizing this paradigm of computing in health informatics will benefit patients, care providers, and governments significantly. This work is a novel approach to realize health analytics as services in critical care units in particular. OBJECTIVE: To design, implement, evaluate, and deploy an extendable big-data compatible framework for health-analytics-as-a-service that offers both real-time and retrospective analysis. METHODS: We present a novel framework that can realize health data analytics-as-a-service. The framework is flexible and configurable for different scenarios by utilizing the latest technologies and best practices for data acquisition, transformation, storage, analytics, knowledge extraction, and visualization. We have instantiated the proposed method, through the Artemis project, that is, a customization of the framework for live monitoring and retrospective research on premature babies and ill term infants in neonatal intensive care units (NICUs). RESULTS: We demonstrated the proposed framework in this paper for monitoring NICUs and refer to it as the Artemis-In-Cloud (Artemis-IC) project. A pilot of Artemis has been deployed in the SickKids hospital NICU. By infusing the output of this pilot set up to an analytical model, we predict important performance measures for the final deployment of Artemis-IC. This process can be carried out for other hospitals following the same steps with minimal effort. SickKids’ NICU has 36 beds and can classify the patients generally into 5 different types including surgical and premature babies. The arrival rate is estimated as 4.5 patients per day, and the average length of stay was calculated as 16 days. Mean number of medical monitoring algorithms per patient is 9, which renders 311 live algorithms for the whole NICU running on the framework. The memory and computation power required for Artemis-IC to handle the SickKids NICU will be 32 GB and 16 CPU cores, respectively. The required amount of storage was estimated as 8.6 TB per year. There will always be 34.9 patients in SickKids NICU on average. Currently, 46% of patients cannot get admitted to SickKids NICU due to lack of resources. By increasing the capacity to 90 beds, all patients can be accommodated. For such a provisioning, Artemis-IC will need 16 TB of storage per year, 55 GB of memory, and 28 CPU cores. CONCLUSIONS: Our contributions in this work relate to a cloud architecture for the analysis of physiological data for clinical decisions support for tertiary care use. We demonstrate how to size the equipment needed in the cloud for that architecture based on a very realistic assessment of the patient characteristics and the associated clinical decision support algorithms that would be required to run for those patients. We show the principle of how this could be performed and furthermore that it can be replicated for any critical care setting within a tertiary institution.
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spelling pubmed-47049622016-01-12 Real-Time and Retrospective Health-Analytics-as-a-Service: A Novel Framework Khazaei, Hamzeh McGregor, Carolyn Eklund, J Mikael El-Khatib, Khalil JMIR Med Inform Original Paper BACKGROUND: Analytics-as-a-service (AaaS) is one of the latest provisions emerging from the cloud services family. Utilizing this paradigm of computing in health informatics will benefit patients, care providers, and governments significantly. This work is a novel approach to realize health analytics as services in critical care units in particular. OBJECTIVE: To design, implement, evaluate, and deploy an extendable big-data compatible framework for health-analytics-as-a-service that offers both real-time and retrospective analysis. METHODS: We present a novel framework that can realize health data analytics-as-a-service. The framework is flexible and configurable for different scenarios by utilizing the latest technologies and best practices for data acquisition, transformation, storage, analytics, knowledge extraction, and visualization. We have instantiated the proposed method, through the Artemis project, that is, a customization of the framework for live monitoring and retrospective research on premature babies and ill term infants in neonatal intensive care units (NICUs). RESULTS: We demonstrated the proposed framework in this paper for monitoring NICUs and refer to it as the Artemis-In-Cloud (Artemis-IC) project. A pilot of Artemis has been deployed in the SickKids hospital NICU. By infusing the output of this pilot set up to an analytical model, we predict important performance measures for the final deployment of Artemis-IC. This process can be carried out for other hospitals following the same steps with minimal effort. SickKids’ NICU has 36 beds and can classify the patients generally into 5 different types including surgical and premature babies. The arrival rate is estimated as 4.5 patients per day, and the average length of stay was calculated as 16 days. Mean number of medical monitoring algorithms per patient is 9, which renders 311 live algorithms for the whole NICU running on the framework. The memory and computation power required for Artemis-IC to handle the SickKids NICU will be 32 GB and 16 CPU cores, respectively. The required amount of storage was estimated as 8.6 TB per year. There will always be 34.9 patients in SickKids NICU on average. Currently, 46% of patients cannot get admitted to SickKids NICU due to lack of resources. By increasing the capacity to 90 beds, all patients can be accommodated. For such a provisioning, Artemis-IC will need 16 TB of storage per year, 55 GB of memory, and 28 CPU cores. CONCLUSIONS: Our contributions in this work relate to a cloud architecture for the analysis of physiological data for clinical decisions support for tertiary care use. We demonstrate how to size the equipment needed in the cloud for that architecture based on a very realistic assessment of the patient characteristics and the associated clinical decision support algorithms that would be required to run for those patients. We show the principle of how this could be performed and furthermore that it can be replicated for any critical care setting within a tertiary institution. Gunther Eysenbach 2015-11-18 /pmc/articles/PMC4704962/ /pubmed/26582268 http://dx.doi.org/10.2196/medinform.4640 Text en ©Hamzeh Khazaei, Carolyn McGregor, J Mikael Eklund, Khalil El-Khatib. Originally published in JMIR Medical Informatics (http://medinform.jmir.org), 18.11.2015. https://creativecommons.org/licenses/by/2.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0/ (https://creativecommons.org/licenses/by/2.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work, first published in JMIR Medical Informatics, is properly cited. The complete bibliographic information, a link to the original publication on http://medinform.jmir.org/, as well as this copyright and license information must be included.
spellingShingle Original Paper
Khazaei, Hamzeh
McGregor, Carolyn
Eklund, J Mikael
El-Khatib, Khalil
Real-Time and Retrospective Health-Analytics-as-a-Service: A Novel Framework
title Real-Time and Retrospective Health-Analytics-as-a-Service: A Novel Framework
title_full Real-Time and Retrospective Health-Analytics-as-a-Service: A Novel Framework
title_fullStr Real-Time and Retrospective Health-Analytics-as-a-Service: A Novel Framework
title_full_unstemmed Real-Time and Retrospective Health-Analytics-as-a-Service: A Novel Framework
title_short Real-Time and Retrospective Health-Analytics-as-a-Service: A Novel Framework
title_sort real-time and retrospective health-analytics-as-a-service: a novel framework
topic Original Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4704962/
https://www.ncbi.nlm.nih.gov/pubmed/26582268
http://dx.doi.org/10.2196/medinform.4640
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