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DnaC traps DnaB as an open ring and remodels the domain that binds primase

Helicase loading at a DNA replication origin often requires the dynamic interactions between the DNA helicase and an accessory protein. In E. coli, the DNA helicase is DnaB and DnaC is its loading partner. We used the method of hydrogen/deuterium exchange mass spectrometry to address the importance...

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Autores principales: Chodavarapu, Sundari, Jones, A. Daniel, Feig, Michael, Kaguni, Jon M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4705694/
https://www.ncbi.nlm.nih.gov/pubmed/26420830
http://dx.doi.org/10.1093/nar/gkv961
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author Chodavarapu, Sundari
Jones, A. Daniel
Feig, Michael
Kaguni, Jon M.
author_facet Chodavarapu, Sundari
Jones, A. Daniel
Feig, Michael
Kaguni, Jon M.
author_sort Chodavarapu, Sundari
collection PubMed
description Helicase loading at a DNA replication origin often requires the dynamic interactions between the DNA helicase and an accessory protein. In E. coli, the DNA helicase is DnaB and DnaC is its loading partner. We used the method of hydrogen/deuterium exchange mass spectrometry to address the importance of DnaB–DnaC complex formation as a prerequisite for helicase loading. Our results show that the DnaB ring opens and closes, and that specific amino acids near the N-terminus of DnaC interact with a site in DnaB's C-terminal domain to trap it as an open ring. This event correlates with conformational changes of the RecA fold of DnaB that is involved in nucleotide binding, and of the AAA+ domain of DnaC. DnaC also causes an alteration of the helical hairpins in the N-terminal domain of DnaB, presumably occluding this region from interacting with primase. Hence, DnaC controls the access of DnaB by primase.
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spelling pubmed-47056942016-01-11 DnaC traps DnaB as an open ring and remodels the domain that binds primase Chodavarapu, Sundari Jones, A. Daniel Feig, Michael Kaguni, Jon M. Nucleic Acids Res Genome Integrity, Repair and Replication Helicase loading at a DNA replication origin often requires the dynamic interactions between the DNA helicase and an accessory protein. In E. coli, the DNA helicase is DnaB and DnaC is its loading partner. We used the method of hydrogen/deuterium exchange mass spectrometry to address the importance of DnaB–DnaC complex formation as a prerequisite for helicase loading. Our results show that the DnaB ring opens and closes, and that specific amino acids near the N-terminus of DnaC interact with a site in DnaB's C-terminal domain to trap it as an open ring. This event correlates with conformational changes of the RecA fold of DnaB that is involved in nucleotide binding, and of the AAA+ domain of DnaC. DnaC also causes an alteration of the helical hairpins in the N-terminal domain of DnaB, presumably occluding this region from interacting with primase. Hence, DnaC controls the access of DnaB by primase. Oxford University Press 2016-01-08 2015-09-29 /pmc/articles/PMC4705694/ /pubmed/26420830 http://dx.doi.org/10.1093/nar/gkv961 Text en © The Author(s) 2015. Published by Oxford University Press on behalf of Nucleic Acids Research. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Genome Integrity, Repair and Replication
Chodavarapu, Sundari
Jones, A. Daniel
Feig, Michael
Kaguni, Jon M.
DnaC traps DnaB as an open ring and remodels the domain that binds primase
title DnaC traps DnaB as an open ring and remodels the domain that binds primase
title_full DnaC traps DnaB as an open ring and remodels the domain that binds primase
title_fullStr DnaC traps DnaB as an open ring and remodels the domain that binds primase
title_full_unstemmed DnaC traps DnaB as an open ring and remodels the domain that binds primase
title_short DnaC traps DnaB as an open ring and remodels the domain that binds primase
title_sort dnac traps dnab as an open ring and remodels the domain that binds primase
topic Genome Integrity, Repair and Replication
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4705694/
https://www.ncbi.nlm.nih.gov/pubmed/26420830
http://dx.doi.org/10.1093/nar/gkv961
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