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DnaC traps DnaB as an open ring and remodels the domain that binds primase
Helicase loading at a DNA replication origin often requires the dynamic interactions between the DNA helicase and an accessory protein. In E. coli, the DNA helicase is DnaB and DnaC is its loading partner. We used the method of hydrogen/deuterium exchange mass spectrometry to address the importance...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4705694/ https://www.ncbi.nlm.nih.gov/pubmed/26420830 http://dx.doi.org/10.1093/nar/gkv961 |
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author | Chodavarapu, Sundari Jones, A. Daniel Feig, Michael Kaguni, Jon M. |
author_facet | Chodavarapu, Sundari Jones, A. Daniel Feig, Michael Kaguni, Jon M. |
author_sort | Chodavarapu, Sundari |
collection | PubMed |
description | Helicase loading at a DNA replication origin often requires the dynamic interactions between the DNA helicase and an accessory protein. In E. coli, the DNA helicase is DnaB and DnaC is its loading partner. We used the method of hydrogen/deuterium exchange mass spectrometry to address the importance of DnaB–DnaC complex formation as a prerequisite for helicase loading. Our results show that the DnaB ring opens and closes, and that specific amino acids near the N-terminus of DnaC interact with a site in DnaB's C-terminal domain to trap it as an open ring. This event correlates with conformational changes of the RecA fold of DnaB that is involved in nucleotide binding, and of the AAA+ domain of DnaC. DnaC also causes an alteration of the helical hairpins in the N-terminal domain of DnaB, presumably occluding this region from interacting with primase. Hence, DnaC controls the access of DnaB by primase. |
format | Online Article Text |
id | pubmed-4705694 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-47056942016-01-11 DnaC traps DnaB as an open ring and remodels the domain that binds primase Chodavarapu, Sundari Jones, A. Daniel Feig, Michael Kaguni, Jon M. Nucleic Acids Res Genome Integrity, Repair and Replication Helicase loading at a DNA replication origin often requires the dynamic interactions between the DNA helicase and an accessory protein. In E. coli, the DNA helicase is DnaB and DnaC is its loading partner. We used the method of hydrogen/deuterium exchange mass spectrometry to address the importance of DnaB–DnaC complex formation as a prerequisite for helicase loading. Our results show that the DnaB ring opens and closes, and that specific amino acids near the N-terminus of DnaC interact with a site in DnaB's C-terminal domain to trap it as an open ring. This event correlates with conformational changes of the RecA fold of DnaB that is involved in nucleotide binding, and of the AAA+ domain of DnaC. DnaC also causes an alteration of the helical hairpins in the N-terminal domain of DnaB, presumably occluding this region from interacting with primase. Hence, DnaC controls the access of DnaB by primase. Oxford University Press 2016-01-08 2015-09-29 /pmc/articles/PMC4705694/ /pubmed/26420830 http://dx.doi.org/10.1093/nar/gkv961 Text en © The Author(s) 2015. Published by Oxford University Press on behalf of Nucleic Acids Research. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Genome Integrity, Repair and Replication Chodavarapu, Sundari Jones, A. Daniel Feig, Michael Kaguni, Jon M. DnaC traps DnaB as an open ring and remodels the domain that binds primase |
title | DnaC traps DnaB as an open ring and remodels the domain that binds primase |
title_full | DnaC traps DnaB as an open ring and remodels the domain that binds primase |
title_fullStr | DnaC traps DnaB as an open ring and remodels the domain that binds primase |
title_full_unstemmed | DnaC traps DnaB as an open ring and remodels the domain that binds primase |
title_short | DnaC traps DnaB as an open ring and remodels the domain that binds primase |
title_sort | dnac traps dnab as an open ring and remodels the domain that binds primase |
topic | Genome Integrity, Repair and Replication |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4705694/ https://www.ncbi.nlm.nih.gov/pubmed/26420830 http://dx.doi.org/10.1093/nar/gkv961 |
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